RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TRIT1Q9H3H1 467 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 MORF4L1Q9UBU8 362 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 RASGRP1O95267 797 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 AZGP1P25311 298 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 HOXD13P35453 343 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 TTPAP49638 278 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 HNMTP50135 292 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 DCDC1P59894 354 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 RFX4Q33E94 735 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 GFOD2Q3B7J2 385 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ARHGAP36Q6ZRI8 547 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 NKAPQ8N5F7 415 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC15A4Q8N697 577 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ZFPM2Q8WW38 1151 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 NODALQ96S42 347 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ZNF670Q9BS34 389 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ACSS2Q9NR19 701 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 VIRMAQ69YN4 1812 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 AP3D1O14617 1153 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC25A14O95258 325 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 CST3P01034 146 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 HLA-DQA2P01906 255 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 RPLP0P05388 317 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 LINC00032P0C843 101 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 HNRNPLP14866 589 aaKnown RBP eCLIP10.95□□□□□ -0.663e-11■■□□□ 13.3
SMARCE1-202ENST00000348513 TPMTP51580 245 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 CLCNKBP51801 687 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 HERVK_113P63132 956 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 RPL38P63173 70 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC9A9Q8IVB4 645 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ING5Q8WYH8 240 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 PCDHB18PQ96TA0 734 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 TLE6Q9H808 572 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 ERVMER34-1Q9H9K5 563 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 LYVE1Q9Y5Y7 322 aa10.95□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3DA0A087WVF3 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3IA0A087WXS9 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3EA0A087X179 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3KA0A087X1G2 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3FA6NER0 549 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3LB9A6J9 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TIPRLO75663 272 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PNPP00491 289 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3HP0C7X1 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 MERTKQ12866 999 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TUSC3Q13454 348 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CERCAMQ5T4B2 595 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3GQ6DHY5 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3CQ6IPX1 549 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RAB12Q6IQ22 244 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 Q6ZNX1 250 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC51BQ86UW2 128 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CEP97Q8IW35 865 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SLITRK4Q8IW52 837 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TBC1D3Q8IZP1 549 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 MARVELD2Q8N4S9 558 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ANGPTL6Q8NI99 470 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 DNAJB14Q8TBM8 379 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GAB3Q8WWW8 586 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 KREMEN1Q96MU8 473 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RIMKLBQ9ULI2 386 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TNPO3Q9Y5L0 923 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PTCH2Q9Y6C5 1203 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RHPN2P1A8MT19 583 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 MID1O15344 667 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 HMGB3O15347 200 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ITGAVP06756 1048 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GLUD2P49448 558 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ARF5P84085 180 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PCBP1Q15365 356 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 FAM110CQ1W6H9 321 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 OLFML2AQ68BL7 652 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RELL1Q8IUW5 271 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 BPIFB1Q8TDL5 484 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GTF2H4Q92759 462 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LINGO1Q96FE5 620 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GON7Q9BXV9 100 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 A0A088AWK7 358 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 KANTRA0A1W2PQU2 76 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 DFNA5O60443 496 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ELFN1P0C7U0 828 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LBPP18428 481 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ZNF10P21506 573 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ALDH4A1P30038 563 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RAB10P61026 200 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ATP6V0D1P61421 351 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GPRC6AQ5T6X5 926 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LINGO4Q6UY18 593 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PIWIL2Q8TC59 973 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms