RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 COPS8Q99627 209 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 TMEM121Q9BTD3 319 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 SYTL2Q9HCH5 934 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 PIH1D1Q9NWS0 290 aaKnown RBP12.12□□□□□ -0.47
SGCA-202ENST00000344627 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 CROTQ9UKG9 612 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 RARRES3Q9UL19 164 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 IGHV5-51A0A0C4DH38 117 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 DDX3YO15523 660 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 PSMD3O43242 534 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 SPAG6O75602 509 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 CREG1O75629 220 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 METTL18O95568 372 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 GAS8O95995 478 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 PMS2P54278 862 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 KCNAB1Q14722 419 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 SKIDA1Q1XH10 827 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 BCL7AQ4VC05 210 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 NXPE1Q8N323 547 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 HEXDCQ8WVB3 486 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 FERD3LQ96RJ6 166 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 MAP3K3Q99759 626 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 CCM2Q9BSQ5 444 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 VPS37BQ9H9H4 285 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 LHX9Q9NQ69 397 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 ZNF71Q9NQZ8 489 aaPredicted RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
SGCA-202ENST00000344627 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
SGCA-202ENST00000344627 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 OR5K3A6NET4 321 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 MATN2O00339 956 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 LDB2O43679 373 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
SGCA-202ENST00000344627 NDUFS1P28331 727 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 CDKN1CP49918 316 aaPredicted RBP12.1□□□□□ -0.47
SGCA-202ENST00000344627 RPS15P62841 145 aaKnown RBP12.1□□□□□ -0.47
SGCA-202ENST00000344627 PRKAA1Q13131 559 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 TUBB3Q13509 450 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 DNASE1L3Q13609 305 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 P3H1Q32P28 736 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 GPR33Q49SQ1 333 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 TMTC4Q5T4D3 741 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 SYVN1Q86TM6 617 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 SERPINA9Q86WD7 417 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 TMEM139Q8IV31 216 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 DNAAF3Q8N9W5 541 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 OR4E2Q8NGC2 313 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 HM13Q8TCT9 377 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 STYXQ8WUJ0 223 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 MIB2Q96AX9 1013 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 LRFN5Q96NI6 719 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 LATS2Q9NRM7 1088 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 SOHLH2Q9NX45 425 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 GUCA1BQ9UMX6 200 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
SGCA-202ENST00000344627 SPTBP11277 2137 aa12.1□□□□□ -0.47
SGCA-202ENST00000344627 GSAPA4D1B5 854 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 TLCD2A6NGC4 264 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 E7EVH7 732 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 IFRD1O00458 451 aaPredicted RBP12.09□□□□□ -0.47
SGCA-202ENST00000344627 MAP3K7O43318 606 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 KLHL41O60662 606 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 IFNB1P01574 187 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 EBLN1P0CF75 366 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 PRSS56P0CW18 603 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 FOLR1P15328 257 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 CDC25BP30305 580 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 PRLHRP49683 370 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 GDF10P55107 478 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 GSDMDP57764 484 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 HSD11B2P80365 405 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 CACNG1Q06432 222 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
SGCA-202ENST00000344627 SEMA5AQ13591 1074 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 SNX1Q13596 522 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 ERV3-1Q14264 604 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 UGT8Q16880 541 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 CCDC38Q502W7 563 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms