RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CACNA1GO43497 2377 aa15.68■□□□□ 0.1
ATG4B-201ENST00000344376 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
ATG4B-201ENST00000344376 EFSO43281 561 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 RAD1O60671 282 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 ARL4DP49703 201 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 PRKAA1Q13131 559 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 SYTL3Q4VX76 610 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 XKR5Q6UX68 686 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 MICALCLQ6ZW33 695 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 CACNA2D3Q8IZS8 1091 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 SLC35F6Q8N357 371 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 ACVR1CQ8NER5 493 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 NKD1Q969G9 470 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 MAGOHBQ96A72 148 aaKnown RBP15.67■□□□□ 0.1
ATG4B-201ENST00000344376 SGSM3Q96HU1 749 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 FERD3LQ96RJ6 166 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 TSSK1BQ9BXA7 367 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 OR52A5Q9H2C5 316 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 MVB12BQ9H7P6 319 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 TTC7AQ9ULT0 858 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-201ENST00000344376 IGSF10Q6WRI0 2623 aa15.67■□□□□ 0.1
ATG4B-201ENST00000344376 GOLGA6L10A0A0M3HER8 536 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 UBA6A0AVT1 1052 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TLCD2A6NGC4 264 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TK2O00142 265 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 KIF1CO43896 1103 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PREPP48147 710 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PLOD1Q02809 727 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 IL11RAQ14626 422 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 NLGN4XQ8N0W4 816 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 NLGN4YQ8NFZ3 816 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 LCN9Q8WX39 176 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 KLHL6Q8WZ60 621 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 ELMO1Q92556 727 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 ZNF778Q96MU6 729 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 BBC3Q96PG8 261 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TRIT1Q9H3H1 467 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 APMAPQ9HDC9 416 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 CHRAC1Q9NRG0 131 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 CATSPERZQ9NTU4 200 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 AHCTF1Q8WYP5 2266 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 OR6C74A6NCV1 312 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 MATN2O00339 956 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 STK17BO94768 372 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 NELFEP18615 380 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 MAP4P27816 1152 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 VPS41P49754 854 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 GPS1Q13098 491 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TRIP13Q15645 432 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 ZNF658BQ4V348 819 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 LRRC8BQ6P9F7 803 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 KMT5CQ86Y97 462 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 CARFQ8N187 725 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 SIDT2Q8NBJ9 832 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 SLC39A7Q92504 469 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 KIAA1143Q96AT1 154 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 OR6C1Q96RD1 312 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 AP1M1Q9BXS5 423 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 SRMSQ9H3Y6 488 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PDE7BQ9NP56 450 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 TRMT1Q9NXH9 659 aaKnown RBP15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PILRAQ9UKJ1 303 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PCDHGA4Q9Y5G9 962 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 PRSS21Q9Y6M0 314 aa15.66■□□□□ 0.1
ATG4B-201ENST00000344376 ESPNB1AK53 854 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 KRT14P02533 472 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 PDHA2P29803 388 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 TTPAP49638 278 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 PPP1CAP62136 330 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 SH3BP2P78314 561 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 CRADDP78560 199 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 SRSF6Q13247 344 aaKnown RBP15.65■□□□□ 0.1
ATG4B-201ENST00000344376 BOP1Q14137 746 aaKnown RBP15.65■□□□□ 0.1
ATG4B-201ENST00000344376 ZNF534Q76KX8 674 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 RASGRP3Q8IV61 690 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 OR4E2Q8NGC2 313 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 GRK7Q8WTQ7 553 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 TFGQ92734 400 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-201ENST00000344376 WBP1Q96G27 269 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 SLC41A2Q96JW4 573 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 OSBPL9Q96SU4 736 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 EFHD1Q9BUP0 239 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 ULBP3Q9BZM4 244 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 KCNF1Q9H3M0 494 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 MRM3Q9HC36 420 aaKnown RBP15.65■□□□□ 0.1
ATG4B-201ENST00000344376 SEMA5BQ9P283 1151 aa15.65■□□□□ 0.1
ATG4B-201ENST00000344376 TMEM184BQ9Y519 407 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-201ENST00000344376 IGHV5-51A0A0C4DH38 117 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 OR1I1O60431 355 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 MGAT1P26572 445 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 COILP38432 576 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-201ENST00000344376 TERF1P54274 439 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 ACY1Q03154 408 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 CYP1B1Q16678 543 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 KIAA1614Q5VZ46 1190 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 ARMC3Q5W041 872 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 TTC27Q6P3X3 843 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms