RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
SFN-201ENST00000339276 PCDHGA1Q9Y5H4 931 aa16.36■□□□□ 0.21
SFN-201ENST00000339276 ASXL3Q9C0F0 2248 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 RHPN2P1A8MT19 583 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 GPC4O75487 556 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 DKK1O94907 266 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 VIPP01282 170 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 APOA4P06727 396 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 GP1BAP07359 652 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 MTHFD1P11586 935 aaKnown RBP16.35■□□□□ 0.21
SFN-201ENST00000339276 CLCN7P51798 805 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 ILKQ13418 452 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 SLMAPQ14BN4 828 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 TMED2Q15363 201 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 PDZD3Q86UT5 571 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 TRIM48Q8IWZ4 208 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 CTAGE3PQ8IX95 158 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 Q8N9G6 341 aaPredicted RBP16.35■□□□□ 0.21
SFN-201ENST00000339276 EIF1ADQ8N9N8 165 aaKnown RBP16.35■□□□□ 0.21
SFN-201ENST00000339276 SIDT2Q8NBJ9 832 aaKnown RBP16.35■□□□□ 0.21
SFN-201ENST00000339276 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 ASZ1Q8WWH4 475 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 KCNJ9Q92806 393 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 SLC30A3Q99726 388 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 STN1Q9H668 368 aaKnown RBP16.35■□□□□ 0.21
SFN-201ENST00000339276 POT1Q9NUX5 634 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 NSMCE4AQ9NXX6 385 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 COMMD10Q9Y6G5 202 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 RP1P56715 2156 aa16.35■□□□□ 0.21
SFN-201ENST00000339276 PHBP35232 272 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 VSNL1P62760 191 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 TIAL1Q01085 375 aaKnown RBP eCLIP16.34■□□□□ 0.21
SFN-201ENST00000339276 PLOD1Q02809 727 aaPredicted RBP16.34■□□□□ 0.21
SFN-201ENST00000339276 NR1D2Q14995 579 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 PLEKHS1Q5SXH7 462 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 DHRS13Q6UX07 377 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 DGLUCYQ7Z3D6 616 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 SPRED1Q7Z699 444 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 PIM3Q86V86 326 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 ZC3HC1Q86WB0 502 aaKnown RBP16.34■□□□□ 0.21
SFN-201ENST00000339276 SLC22A15Q8IZD6 547 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 ZBTB2Q8N680 514 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 PPM1NQ8N819 430 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 AVL9Q8NBF6 648 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 GPR21Q99679 349 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 MCMBPQ9BTE3 642 aa16.34■□□□□ 0.21
SFN-201ENST00000339276 RRAGDQ9NQL2 400 aaPredicted RBP16.34■□□□□ 0.21
SFN-201ENST00000339276 TSR3Q9UJK0 312 aaKnown RBP16.34■□□□□ 0.21
SFN-201ENST00000339276 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 KPNA5O15131 536 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 SLCO2B1O94956 709 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 PNLIPP16233 465 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 ACADLP28330 430 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 ALDH4A1P30038 563 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 PGGT1BP53609 377 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 PMS2P54278 862 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 CDKN2DP55273 166 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 CLDN6P56747 220 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 OR1D5P58170 312 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 GBX1Q14549 363 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 HECTD2Q5U5R9 776 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 ACVR1CQ8NER5 493 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 UHMK1Q8TAS1 419 aaKnown RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 CD200R1Q8TD46 325 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 SLC38A3Q99624 504 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 CPNE1Q99829 537 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 TXLNGYQ9BZA5 131 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 RHOJQ9H4E5 214 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 SLC40A1Q9NP59 571 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 LATS2Q9NRM7 1088 aa16.33■□□□□ 0.2
SFN-201ENST00000339276 CORO1CQ9ULV4 474 aaPredicted RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 COL27A1Q8IZC6 1860 aaPredicted RBP16.33■□□□□ 0.2
SFN-201ENST00000339276 FAM95CA0A1B0GW59 222 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 B4GAT1O43505 415 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 OPA1O60313 960 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 VPS26AO75436 327 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 FAM155BO75949 473 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 RPLP0P05388 317 aaKnown RBP16.32■□□□□ 0.2
SFN-201ENST00000339276 GP5P40197 560 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 GPR3P46089 330 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 CCL7P80098 99 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 GPR18Q14330 331 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 ACSBG2Q5FVE4 666 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 FAM45BPQ6NSW5 357 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 TMEM26Q6ZUK4 368 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 FAM45AQ8TCE6 357 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 JPH3Q8WXH2 748 aaPredicted RBP16.32■□□□□ 0.2
SFN-201ENST00000339276 TFGQ92734 400 aaPredicted RBP16.32■□□□□ 0.2
SFN-201ENST00000339276 SH3KBP1Q96B97 665 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
SFN-201ENST00000339276 VPS39Q96JC1 886 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 ELMO2Q96JJ3 720 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 FERD3LQ96RJ6 166 aa16.32■□□□□ 0.2
SFN-201ENST00000339276 RBBP8Q99708 897 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms