RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ADAM21Q9UKJ8 722 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 DGKBQ9Y6T7 804 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 H3BM21 787 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 WNT1P04628 370 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ATP5F1P24539 256 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 NFKB2Q00653 900 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 LRP8Q14114 963 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 FZD2Q14332 565 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PPP1R3AQ16821 1122 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TUBB8Q3ZCM7 444 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TTC19Q6DKK2 380 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SBSNQ6UWP8 590 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 CHST15Q7LFX5 561 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 NUDCD3Q8IVD9 361 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 C10orf107Q8IVU9 208 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 RAB3IL1Q8TBN0 382 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ASB11Q8WXH4 323 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 OARD1Q9Y530 152 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 WDR91A4D1P6 747 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 DLX3O60479 287 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 GPR37L1O60883 481 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SMIM24O75264 130 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 RASGRP1O95267 797 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MATN4O95460 622 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TPBGLP0DKB5 382 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 KCNA4P22459 653 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MAOBP27338 520 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PDHA2P29803 388 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 CNR2P34972 360 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 KCNC1P48547 511 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SRSF5Q13243 272 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 METRNLQ641Q3 311 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 FRA10AC1Q70Z53 315 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PARGQ86W56 976 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 GPSM1Q86YR5 675 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SREK1Q8WXA9 508 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TSACCQ96A04 125 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 CCDC126Q96EE4 140 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 OR52A5Q9H2C5 316 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 RDH14Q9HBH5 336 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 KLC4Q9NSK0 619 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 OXSMQ9NWU1 459 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ADAMTS6Q9UKP5 1117 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ACSL5Q9ULC5 683 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PNMA8BQ9ULN7 279 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 DNAJC16Q9Y2G8 782 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ZFC3H1O60293 1989 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 TP53BP1Q12888 1972 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 A8MT66 165 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SUPT3HB4E1H0 165 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 GFYI3L273 518 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 UBXN8O00124 270 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 KLK8O60259 260 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SUPT3HO75486 399 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 CLCNKAP51800 687 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 PRKAA2P54646 552 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 GNGT1P63211 74 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 RGS9BPQ6ZS82 235 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 UBE2R2Q712K3 238 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC22A9Q8IVM8 553 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 RGL4Q8IZJ4 473 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 EXT2Q93063 718 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC12A9Q9BXP2 914 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 ZSCAN32Q9NX65 697 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SPAG17Q6Q759 2223 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 HRO43593 1189 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SHOX2O60902 331 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 H2AFYO75367 372 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 PSIP1O75475 530 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 TNFP01375 233 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 SP9P0CG40 484 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 FGF3P11487 239 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 MTHFD2P13995 350 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 BGNP21810 368 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 HK3P52790 923 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 DNAJB13P59910 316 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 ASPHQ12797 758 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 TGFBIQ15582 683 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 PLK5Q496M5 336 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 LIPMQ5VYY2 423 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 HID1Q8IV36 788 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 LRRC8CQ8TDW0 803 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF75CPQ92670 426 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 RMDN2Q96LZ7 410 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 FOPNLQ96NB1 174 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 KCNK6Q9Y257 313 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms