RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ADGRE3Q9BY15 652 aa12.24□□□□□ -0.45
BEST3-201ENST00000266661 POLR1BQ9H9Y6 1135 aa12.24□□□□□ -0.45
BEST3-201ENST00000266661 ELOVL2Q9NXB9 296 aa12.24□□□□□ -0.45
BEST3-201ENST00000266661 IFT80Q9P2H3 777 aaPredicted RBP12.24□□□□□ -0.45
BEST3-201ENST00000266661 DNMT3BQ9UBC3 853 aaKnown RBP12.24□□□□□ -0.45
BEST3-201ENST00000266661 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
BEST3-201ENST00000266661 ZNF711Q9Y462 761 aa12.24□□□□□ -0.45
BEST3-201ENST00000266661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 A0A1B0GVM2 712 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PRMT5O14744 637 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 NBNO60934 754 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 HPRP00739 348 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TIMP1P01033 207 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 RPS3P23396 243 aaKnown RBP eCLIP12.23□□□□□ -0.45
BEST3-201ENST00000266661 GATMP50440 423 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 MTPNP58546 118 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 GTF2H2Q13888 395 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 AP5B1Q2VPB7 878 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 GTF2H2CQ6P1K8 395 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ZNF773Q6PK81 442 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 IL27RAQ6UWB1 636 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 Q6ZNX1 250 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 EGFL6Q8IUX8 553 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 OR13F1Q8NGS4 319 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 BCL7CQ8WUZ0 217 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TMBIM1Q969X1 311 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 MUS81Q96NY9 551 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 NAA50Q9GZZ1 169 aaKnown RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 PIF1Q9H611 641 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ASIC5Q9NY37 505 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 VAPAQ9P0L0 249 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TMEM9Q9P0T7 183 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PCDHB1Q9Y5F3 818 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PTPRSQ13332 1948 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PLXNA4Q9HCM2 1894 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 CROCCQ5TZA2 2017 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TRBV5-3A0A0A0MS03 114 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 SH3PXD2BA1X283 911 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 H7C4K7 107 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 CBX4O00257 560 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 GFRA2O00451 464 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 GIPC1O14908 333 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 DFNA5O60443 496 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ALDH2P05091 517 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 HMGA1P17096 107 aaKnown RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 MSH3P20585 1137 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 SOX11P35716 441 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 HMGCLP35914 325 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 RANBP1P43487 201 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 XAF1Q6GPH4 301 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TMEM214Q6NUQ4 689 aaKnown RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 TMEM26Q6ZUK4 368 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 FKBP9P1Q75LS8 142 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 LRRC8DQ7L1W4 858 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ITIH5Q86UX2 942 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TMEM173Q86WV6 379 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 AADATQ8N5Z0 425 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 FAM86B1Q8N7N1 296 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 EFHBQ8N7U6 833 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
BEST3-201ENST00000266661 PJA1Q8NG27 643 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TBC1D15Q8TC07 691 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 LKAAEAR1Q8TD35 194 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 VPS50Q96JG6 964 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 C19orf43Q9BQ61 176 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 MAGEE1Q9HCI5 957 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 GKN1Q9NS71 199 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 PRKAG2Q9UGJ0 569 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 STOML2Q9UJZ1 356 aa12.23□□□□□ -0.45
BEST3-201ENST00000266661 TRBV5-4A0A0C4DH59 114 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 FFAR2O15552 330 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 DEAF1O75398 565 aaPredicted RBP12.22□□□□□ -0.45
BEST3-201ENST00000266661 SEC14L2O76054 403 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 OTCP00480 354 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 CNPP09543 421 aaKnown RBP12.22□□□□□ -0.45
BEST3-201ENST00000266661 CD247P20963 164 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 CORO1AP31146 461 aaKnown RBP12.22□□□□□ -0.45
BEST3-201ENST00000266661 CASP2P42575 452 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 YAP1P46937 504 aaKnown RBP12.22□□□□□ -0.45
BEST3-201ENST00000266661 PLCL1Q15111 1095 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 CDKN3Q16667 212 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 PLA2G4EQ3MJ16 856 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 INO80DQ53TQ3 878 aaPredicted RBP12.22□□□□□ -0.45
BEST3-201ENST00000266661 HECTD3Q5T447 861 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 ADGRF1Q5T601 910 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 GPR107Q5VW38 600 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 TRIM46Q7Z4K8 759 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
BEST3-201ENST00000266661 SLC22A17Q8WUG5 538 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms