RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
SCAF11-201ENST00000266589 OR2AG1Q9H205 316 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 TUBB1Q9H4B7 451 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
SCAF11-201ENST00000266589 PARVBQ9HBI1 364 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 ARL15Q9NXU5 204 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 BTRCQ9Y297 605 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 TIMM22Q9Y584 194 aa11.34□□□□□ -0.59
SCAF11-201ENST00000266589 LOC100653049A0A140TA62 436 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 PABPN1LA6NDY0 278 aaKnown RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 GSC2O15499 205 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 AP1G1O43747 822 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 RNASEH2AO75792 299 aaKnown RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 KRT34O76011 436 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 TM7SF2O76062 418 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 SLCO2B1O94956 709 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 OR4F21O95013 312 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 PCDH8O95206 1070 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 UROSP10746 265 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 COX4I1P13073 169 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 PRDX6P30041 224 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 GDF5P43026 501 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 PKNOX1P55347 436 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 RPS14P62263 151 aaKnown RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 SP140Q13342 867 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 NEK10Q6ZWH5 1172 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 CHSY3Q70JA7 882 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 ADGRG6Q86SQ4 1221 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 RALGPS2Q86X27 583 aaPredicted RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 IL17RCQ8NAC3 791 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 PLA2G15Q8NCC3 412 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 MCUR1Q96AQ8 359 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 LENG8Q96PV6 779 aaPredicted RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 CD244Q9BZW8 370 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 EPHX3Q9H6B9 360 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 KCNK12Q9HB15 430 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 TRPV5Q9NQA5 729 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
SCAF11-201ENST00000266589 COPG1Q9Y678 874 aaKnown RBP11.33□□□□□ -0.6
SCAF11-201ENST00000266589 A8MUI8 341 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 OR7A17O14581 309 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 SLC22A2O15244 555 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 SLC16A5O15375 505 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ADAM23O75077 832 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 KLF8O95600 359 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CHEK2O96017 543 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 LINC00032P0C843 101 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CYP2A7P20853 494 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ADSLP30566 484 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 PREPP48147 710 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 MNAT1P51948 309 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ERVPABLB-1P60509 514 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CDKL1Q00532 357 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GTF2H3Q13889 308 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 LARP4Q71RC2 724 aaKnown RBP eCLIP11.32□□□□□ -0.69e-7■■■■■ 27.3
SCAF11-201ENST00000266589 TRAPPC5Q8IUR0 188 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 SLC44A3Q8N4M1 653 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 LILRA3Q8N6C8 439 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CDYL2Q8N8U2 506 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GANCQ8TET4 914 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GLMNQ92990 594 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ATP6V1E2Q96A05 226 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 OPTCQ9UBM4 332 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ANGPTL3Q9Y5C1 460 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GFYI3L273 518 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 UBDO15205 165 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 OTCP00480 354 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 PCCBP05166 539 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HOXB2P14652 356 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CD1EP15812 388 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 COL9A1P20849 921 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GRSF1Q12849 480 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 CDKL4Q5MAI5 379 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 HIC2Q96JB3 615 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 GAS2L1Q99501 681 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 SLC6A17Q9H1V8 727 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 C1orf21Q9H246 121 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-201ENST00000266589 AKTIPQ9H8T0 292 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 TRIM39Q9HCM9 518 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
SCAF11-201ENST00000266589 ATXN10Q9UBB4 475 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms