RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF510Q9Y2H8 683 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 CLDN25C9JDP6 229 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 GNB5O14775 395 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 RASGRP1O95267 797 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 NDST3O95803 873 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 BLMHQ13867 455 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TMC8Q8IU68 726 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TMEM139Q8IV31 216 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 ZFP3Q96NJ6 502 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 KLF15Q9UIH9 416 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 MAN2B2Q9Y2E5 1009 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 PCDHGC4Q9Y5F7 938 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 FKBP7Q9Y680 259 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 HMGB3O15347 200 aaKnown RBP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 CDC40O60508 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TPTEP56180 551 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 CHIT1Q13231 466 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 ZDHHC20Q5W0Z9 365 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 OR5T3Q8NGG3 340 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 B3GALT6Q96L58 329 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 CTPS2Q9NRF8 586 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 SH3D21A4FU49 640 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 SCELO95171 688 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 PAPSS2O95340 614 aaPredicted RBP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 DEFB115Q30KQ5 88 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 CHST9Q7L1S5 443 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 GALNT15Q8N3T1 639 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 ATAD1Q8NBU5 361 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 EVA1BQ9NVM1 165 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 ZNF99A8MXY4 864 aaPredicted RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 TBX1O43435 398 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GADD45GO95257 159 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MTHFD1P11586 935 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SLC9B1Q4ZJI4 515 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 PIK3R3Q92569 461 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 UFD1Q92890 307 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ZNF536O15090 1300 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MPZL2O60487 215 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 UGT1A9O60656 530 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GJA8P48165 433 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GPR153Q6NV75 609 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SERPINA9Q86WD7 417 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SPERTQ8NA61 448 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 UGT1A7Q9HAW7 530 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 UGT1A10Q9HAW8 530 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 UGT1A8Q9HAW9 530 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ZNF541Q9H0D2 1346 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ADAMDEC1O15204 470 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ITGB1P05556 798 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ASGR1P07306 291 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GDF10P55107 478 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 JSRP1Q96MG2 331 aaPredicted RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 DERAQ9Y315 318 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MED31Q9Y3C7 131 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 PTPRJQ12913 1337 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SAP18O00422 153 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 PRH1P02810 166 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 PPP3R1P63098 170 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 CSTF1Q05048 431 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SMU1Q2TAY7 513 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MGME1Q9BQP7 344 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GRIN2DO15399 1336 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ANXA2P2A6NMY6 339 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ANXA2P07355 339 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 EIF2S3P41091 472 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 SULT2A1Q06520 285 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 THOC7Q6I9Y2 204 aaKnown RBP17.74■□□□□ 0.43
COL5A3-201ENST00000264828 FAM92BQ6ZTR7 304 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 USP43Q70EL4 1123 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 C4orf32Q8N8J7 132 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ARMC5Q96C12 935 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 ROPN1LQ96C74 230 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GIN1Q9NXP7 522 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 GRHL1Q9NZI5 618 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 MGAT4AQ9UM21 535 aa17.74■□□□□ 0.43
COL5A3-201ENST00000264828 OR6C75A6NL08 312 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 SLC9A4Q6AI14 798 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 GET4Q7L5D6 327 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CPNE9Q8IYJ1 553 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 ZNF366Q8N895 744 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 EZH1Q92800 747 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 EFCAB9A8MZ26 197 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 SERPINA3P01011 423 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 MMP3P08254 477 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 F7P08709 466 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CREB1P16220 341 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CCNCP24863 283 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 TSPAN5P62079 268 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 TLR1Q15399 786 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 TRIM2Q9C040 744 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 SLC17A6Q9P2U8 582 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 PCDHGA10Q9Y5H3 936 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms