RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 RPA4Q13156 261 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 CTBP1Q13363 440 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 KYNUQ16719 465 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 TEDDM1Q5T9Z0 273 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 WASH2PQ6VEQ5 465 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 ZNF547Q8IVP9 402 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 ARL10Q8N8L6 244 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 Q8N9G6 341 aaPredicted RBP13.37□□□□□ -0.27
UPK1A-201ENST00000222275 OR6C4Q8NGE1 309 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 FGF11Q92914 225 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 P2RY12Q9H244 342 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 CDC42EP4Q9H3Q1 356 aaKnown RBP13.37□□□□□ -0.27
UPK1A-201ENST00000222275 WASH6PQ9NQA3 447 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 KLC4Q9NSK0 619 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 ATXN7L1Q9ULK2 861 aaPredicted RBP13.37□□□□□ -0.27
UPK1A-201ENST00000222275 SATB2Q9UPW6 733 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 RNF215Q9Y6U7 377 aa13.37□□□□□ -0.27
UPK1A-201ENST00000222275 HELZ2Q9BYK8 2649 aaKnown RBP13.37□□□□□ -0.27
UPK1A-201ENST00000222275 AGRPO00253 132 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 ZW10O43264 779 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 OR1I1O60431 355 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 EML2O95834 649 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 APOA4P06727 396 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 PKMP14618 531 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 HALP42357 657 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 CD151P48509 253 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 PMS2P54278 862 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 MAZP56270 477 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 GPX6P59796 221 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 TMED2Q15363 201 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 TRMT10BQ6PF06 316 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 CAPN12Q6ZSI9 719 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 C11orf96Q7Z7L8 435 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 LDB1Q86U70 411 aaPredicted RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 C17orf82Q86X59 251 aaPredicted RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 DENND6AQ8IWF6 608 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 CLDN19Q8N6F1 224 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 SNIP1Q8TAD8 396 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 NAF1Q96HR8 494 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 DEPDC7Q96QD5 511 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 CYTH2Q99418 400 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 DPEP2Q9H4A9 486 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 STN1Q9H668 368 aaKnown RBP13.36□□□□□ -0.27
UPK1A-201ENST00000222275 POLR1BQ9H9Y6 1135 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 PLAC1Q9HBJ0 212 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 NINJ2Q9NZG7 142 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 IL1RAPL1Q9NZN1 696 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 TAAR2Q9P1P5 351 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 KLHL42Q9P2K6 505 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 CRYL1Q9Y2S2 319 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 PRKAB1Q9Y478 270 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 BOD1L1Q8NFC6 3051 aa13.36□□□□□ -0.27
UPK1A-201ENST00000222275 GCN1Q92616 2671 aaKnown RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 A0A087WUV0 522 aaPredicted RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KIR2DS5A0A0G2JLQ3 304 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 A0A0G2JNG1 304 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 B4DGG1 531 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 E5RI56 91 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KIR2DS3K7RE56 304 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 SGTAO43765 313 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 ABHD2P08910 425 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 F3P13726 295 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 FMO4P31512 558 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 SKIV2L2P42285 1042 aaKnown RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 CSE1LP55060 971 aaKnown RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KIR2DS5Q14953 304 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KLHL38Q2WGJ6 581 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 TTLL9Q3SXZ7 439 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 MAP9Q49MG5 647 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 METRNLQ641Q3 311 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 SLC30A9Q6PML9 568 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 ASZ1Q8WWH4 475 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KCNJ9Q92806 393 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 CPNE1Q99829 537 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 CCDC77Q9BR77 488 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 LRRN3Q9H3W5 708 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 OSGEPL1Q9H4B0 414 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 PRORYQ9H606 182 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 FBXO6Q9NRD1 293 aaPredicted RBP13.35□□□□□ -0.27
UPK1A-201ENST00000222275 KCNK6Q9Y257 313 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
UPK1A-201ENST00000222275 PDZK1P1A8MUH7 402 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms