RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	NDRG1	Q92597	394 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	TCF12	Q99081	682 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	SEC61A2	Q9H9S3	476 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	C8A	P07357	584 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	LINGO3	P0C6S8	592 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	HSPA7	P48741	367 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	LDLRAP1	Q5SW96	308 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ARC	Q7LC44	396 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC22A17	Q8WUG5	538 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ANKZF1	Q9H8Y5	726 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	BRD7	Q9NPI1	651 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	NUAK1	O60285	661 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	NME6	O75414	186 aa	Predicted RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	PIAS1	O75925	651 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	INMT	O95050	263 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	CYP1A2	P05177	515 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	FSHR	P23945	695 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	KHK	P50053	298 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	C1orf189	Q5VU69	101 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	DERA	Q9Y315	318 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	DDX3Y	O15523	660 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	CSN2	P05814	226 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	COL6A1	P12109	1028 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	SCNN1A	P37088	669 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	PDK3	Q15120	406 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	MTX3	Q5HYI7	312 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	HDAC7	Q8WUI4	952 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	COPS4	Q9BT78	406 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	HMGXB4	Q9UGU5	601 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	MEMO1	Q9Y316	297 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	RIMS1	Q86UR5	1692 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZNF311	Q5JNZ3	666 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	CAND1	Q86VP6	1230 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	FAM13C	Q8NE31	585 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	RFT1	Q96AA3	541 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	FBXO9	Q9UK97	447 aa	Predicted RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	TNS2	Q63HR2	1409 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZNF16	P17020	682 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	YAP1	P46937	504 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SNTA1	Q13424	505 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	LINGO2	Q7L985	606 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	FSTL5	Q8N475	847 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC22A8	Q8TCC7	542 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	GTPBP3	Q969Y2	492 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC35G5	Q96KT7	338 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	PHF12	Q96QT6	1004 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	TREH	O43280	583 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	MAP3K8	P41279	467 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	BEND4	Q6ZU67	534 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	IQCH	Q86VS3	1027 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ARMC5	Q96C12	935 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	NXPE2	Q96DL1	559 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	GPR21	Q99679	349 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	MECR	Q9BV79	373 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CARS2	Q9HA77	564 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ABCB8	Q9NUT2	735 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	DKKL1	Q9UK85	242 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SPATA31C2	B4DYI2	1134 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	DHX15	O43143	795 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	PCDHGA12	O60330	932 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	PSMA1	P25786	263 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CLCNKB	P51801	687 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ECH1	Q13011	328 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ARFRP1	Q13795	201 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	AAGAB	Q6PD74	315 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	P2RY11	Q96G91	374 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	PNPLA8	Q9NP80	782 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	PARPBP	Q9NWS1	579 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CPQ	Q9Y646	472 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	C5orf51	A6NDU8	294 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ARCN1	P48444	511 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	NCBP2	P52298	156 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	AMZ2	Q86W34	360 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	TDRP	Q86YL5	185 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	NUS1	Q96E22	293 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZNF570	Q96NI8	536 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC39A3	Q9BRY0	314 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	FUT8	Q9BYC5	575 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	NCDN	Q9UBB6	729 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	POU2F3	Q9UKI9	436 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SAP18	O00422	153 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	E2F3	O00716	465 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	BCKDK	O14874	412 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SCGB1D2	O95969	90 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	RLN2	P04090	185 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	RPS9	P46781	194 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	FAM46D	Q8NEK8	389 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	GIPC3	Q8TF64	312 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ANKRD7	Q92527	254 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	GTF2IRD1	Q9UHL9	959 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	MUSK	O15146	869 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZBTB22	O15209	634 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	ARHGAP40	Q5TG30	622 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	GRHL3	Q8TE85	626 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	OSBPL11	Q9BXB4	747 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CENPM	Q9NSP4	180 aa		13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	CCDC59	Q9P031	241 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-222	ENST00000625672	SCD	O00767	359 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms