RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 POLR3HQ9Y535 204 aaPredicted RBP16.26■□□□□ 0.19
LIG1-206ENST00000594067 KDELR3O43731 214 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 EOMESO95936 686 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 CDH1P12830 882 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 FUT4P22083 530 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 SGSHP51688 502 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 GALNT18Q6P9A2 607 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 CYP20A1Q6UW02 462 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 DENND1CQ8IV53 801 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 LEMD2Q8NC56 503 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 BPIFB6Q8NFQ5 453 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 LHPPQ9H008 270 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 GPN2Q9H9Y4 310 aaPredicted RBP16.25■□□□□ 0.19
LIG1-206ENST00000594067 PSME2Q9UL46 239 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 PCDHB3Q9Y5E6 796 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 PCDHGA11Q9Y5H2 935 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 COMMD10Q9Y6G5 202 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 C1orf232A0A0U1RR37 186 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 H3BNC9 293 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 SEPT4O43236 478 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 ALDH2P05091 517 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 TCF3P15923 654 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 NFKBIAP25963 317 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 SHMT2P34897 504 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 FXNQ16595 210 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 GTF2IRD2BQ6EKJ0 949 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 NIPAL1Q6NVV3 410 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 GTF2IRD2Q86UP8 949 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 ITIH5Q86UX2 942 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 RASAL3Q86YV0 1011 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 DPP10Q8N608 796 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 TMBIM1Q969X1 311 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 NACA2Q9H009 215 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 MAGEL2Q9UJ55 1249 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 VPS9D1Q9Y2B5 631 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 WDR37Q9Y2I8 494 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 ARIH1Q9Y4X5 557 aaPredicted RBP16.25■□□□□ 0.19
LIG1-206ENST00000594067 GREB1Q4ZG55 1949 aa16.25■□□□□ 0.19
LIG1-206ENST00000594067 ANKRD66B4E2M5 251 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CFAP99D6REC4 459 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 UPK1AO00322 258 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 GJB5O95377 273 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CDH4P55283 916 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 TUBA3CQ13748 450 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 MRPL58Q14197 206 aaKnown RBP16.24■□□□□ 0.19
LIG1-206ENST00000594067 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 LINGO4Q6UY18 593 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 FRA10AC1Q70Z53 315 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 C16orf59Q7L2K0 433 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 GOLGA7Q7Z5G4 137 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 OR4F6Q8NGB9 312 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 ITFG1Q8TB96 612 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CGREF1Q99674 301 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 HEBP1Q9NRV9 189 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 OR6C75A6NL08 312 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 PFDN6O15212 129 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CLPXO76031 633 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 KCNH1O95259 989 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 RHOCP08134 193 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 ZDHHC11BP0C7U3 371 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 ARSFP54793 590 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 ITGADQ13349 1161 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 MBTPS1Q14703 1052 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 RGS21Q2M5E4 152 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 AP5B1Q2VPB7 878 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 C5orf22Q49AR2 442 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 RFTN2Q52LD8 501 aaPredicted RBP16.24■□□□□ 0.19
LIG1-206ENST00000594067 BROXQ5VW32 411 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 STK32CQ86UX6 486 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CLEC4FQ8N1N0 589 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 RAB2BQ8WUD1 216 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 KCNJ9Q92806 393 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 CCDC97Q96F63 343 aaPredicted RBP16.24■□□□□ 0.19
LIG1-206ENST00000594067 HCSTQ9UBK5 93 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 B3GNT3Q9Y2A9 372 aa16.24■□□□□ 0.19
LIG1-206ENST00000594067 MANSC4A6NHS7 340 aaPredicted RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 OR7A17O14581 309 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 LSM1O15116 133 aaKnown RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 NPPAP01160 153 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 F11P03951 625 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 ANXA6P08133 673 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 ITGB6P18564 788 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 CDH3P22223 829 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 CCND3P30281 292 aaPredicted RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 ABRAXAS2Q15018 415 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 CYP2A13Q16696 494 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 FAM86B1Q8N7N1 296 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 SGCDQ92629 289 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 C17orf80Q9BSJ5 609 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 CARS2Q9HA77 564 aaKnown RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 NUDT4Q9NZJ9 180 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 ABCB7O75027 752 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 PSMA3P25788 255 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 RXRGP48443 463 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms