RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 HECTD2Q5U5R9 776 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PTRHD1Q6GMV3 140 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 DUS1LQ6P1R4 473 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 TMEM207Q6UWW9 146 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CHST15Q7LFX5 561 aaPredicted RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 GALNT13Q8IUC8 556 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 SPATA6LQ8N4H0 392 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 OR4C6Q8NH72 309 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 MZB1Q8WU39 189 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PATE1Q8WXA2 126 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 ANKRD7Q92527 254 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 ELMO2Q96JJ3 720 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 OR2M4Q96R27 311 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 GPR21Q99679 349 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 SLC13A1Q9BZW2 595 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CLPBQ9H078 707 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 RHOJQ9H4E5 214 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 INTS10Q9NVR2 710 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 EURLQ9NYK6 297 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NLGN3Q9NZ94 848 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 VPS18Q9P253 973 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 SPASTQ9UBP0 616 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CIDEBQ9UHD4 219 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 ZNHIT2Q9UHR6 403 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 SLC39A10Q9ULF5 831 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NEUROG3Q9Y4Z2 214 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 EPG5Q9HCE0 2579 aa9.46□□□□□ -0.89
DDX39A-220ENST00000593008 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 TOR1BO14657 336 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 TPP1O14773 563 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CASC3O15234 703 aaKnown RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ERLIN1O75477 346 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 RFPL3O75679 317 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 DKK1O94907 266 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 PYGLP06737 847 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 IVLP07476 585 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ITGA2BP08514 1039 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 HOXC4P09017 264 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ALPPL2P10696 532 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF7P17097 686 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 FDXRP22570 491 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 RPS3P23396 243 aaKnown RBP eCLIP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 PDHA2P29803 388 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 MSH2P43246 934 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CLCN7P51798 805 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 HK3P52790 923 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CTBSQ01459 385 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 GTF2H3Q13889 308 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ACSBG2Q5FVE4 666 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SLC30A9Q6PML9 568 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 UNQ6494/PRO21346Q6UXR6 183 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CERS6Q6ZMG9 384 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 KIAA0408Q6ZU52 694 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 PIWIL4Q7Z3Z4 852 aaKnown RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SLC26A11Q86WA9 606 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CPNE9Q8IYJ1 553 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 LMNTD1Q8N9Z9 388 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CD200R1Q8TD46 325 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CALML6Q8TD86 181 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 HNRNPLLQ8WVV9 542 aaKnown RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 ELMO1Q92556 727 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CDKL2Q92772 493 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 GATA6Q92908 595 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 APOLD1Q96LR9 279 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 RMDN2Q96LZ7 410 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 CPNE1Q99829 537 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 KLC4Q9NSK0 619 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SCHIP1Q9P0W5 487 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-220ENST00000593008 SIRPGQ9P1W8 387 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 GNPTGQ9UJJ9 305 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 PSMD13Q9UNM6 376 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 WDR37Q9Y2I8 494 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 MSRB2Q9Y3D2 182 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 IGF2RP11717 2491 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 FREM2Q5SZK8 3169 aa9.46□□□□□ -0.9
DDX39A-220ENST00000593008 WDFY3Q8IZQ1 3526 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TRBV23OR9-2A0A075B6M9 112 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 LY6G6EA0A0G2JKS1 128 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 A0A1W2PPM1 405 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TLDC2A0PJX2 215 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CPED1A4D0V7 1026 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 H3BMM5 538 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 GOLGA8RI6L899 631 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 AGPSO00116 658 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 YY2O15391 372 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 VEGFDO43915 354 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 SNX2O60749 519 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 WISP3O95389 354 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ALDOAP04075 364 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TUBBP07437 444 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ANXA6P08133 673 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms