RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 EIF2B4Q9UI10 523 aaKnown RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 ASB1Q9Y576 335 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 TRIOBPQ9H2D6 2365 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 CFAP73A6NFT4 308 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 KLF8O95600 359 aaPredicted RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 PCBP2Q15366 365 aaKnown RBP eCLIP19.49■□□□□ 0.716e-9■■■□□ 15.9
TRIM47-204ENST00000587339 NXNQ6DKJ4 435 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 TRMT11Q7Z4G4 463 aaKnown RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 VRK3Q8IV63 474 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 KIF2BQ8N4N8 673 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 AGAP11Q8TF27 550 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 SLC7A6OSQ96CW6 309 aaPredicted RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 CCDC28BQ9BUN5 200 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 LRMDAQ9H2I8 198 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 FBRSQ9HAH7 460 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 LNPEPQ9UIQ6 1025 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 LRRK1Q38SD2 2015 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 IGLON5A6NGN9 336 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 ADAM23O75077 832 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 ENO1P06733 434 aaKnown RBP19.48■□□□□ 0.71
TRIM47-204ENST00000587339 MPC1LP0DKB6 136 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 AOC1P19801 751 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 TMEM220Q6QAJ8 160 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 TRIM74Q86UV6 250 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 OR56A4Q8NGH8 313 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 GANCQ8TET4 914 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 PHF7Q9BWX1 381 aaPredicted RBP19.48■□□□□ 0.71
TRIM47-204ENST00000587339 EPHX3Q9H6B9 360 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 MEAF6Q9HAF1 191 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 FBXL12Q9NXK8 326 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 FAM8A1Q9UBU6 413 aa19.48■□□□□ 0.71
TRIM47-204ENST00000587339 PTBP2Q9UKA9 531 aaKnown RBP19.48■□□□□ 0.71
TRIM47-204ENST00000587339 F5P12259 2224 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 A0A1W2PQF6 199 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SDHDO14521 159 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 GIPC1O14908 333 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 AZIN1O14977 448 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 DCXO43602 365 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 GPC4O75487 556 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 DNTTP04053 509 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 ASGR2P07307 311 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 C8GP07360 202 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 RPIAP49247 311 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 RGS19P49795 217 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SYTL3Q4VX76 610 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SULT1C3Q6IMI6 304 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 UBE2R2Q712K3 238 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TMPRSS6Q8IU80 811 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 CEP70Q8NHQ1 597 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 ASB11Q8WXH4 323 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TMEM159Q96B96 161 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 CCM2Q9BSQ5 444 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 OR2AG1Q9H205 316 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TRIM39Q9HCM9 518 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 ARHGEF3Q9NR81 526 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 DNAJC15Q9Y5T4 150 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 COL4A2P08572 1712 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TMEM202A6NGA9 273 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SOX1O00570 391 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SLCO2B1O94956 709 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 ENO2P09104 434 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-204ENST00000587339 MAGEA9P43362 315 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 INHBCP55103 352 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 RBBP7Q16576 425 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 C18orf21Q32NC0 220 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-204ENST00000587339 UGT3A2Q3SY77 523 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 NEK10Q6ZWH5 1172 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 ADGRG6Q86SQ4 1221 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 RHBDF1Q96CC6 855 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 SLC12A9Q9BXP2 914 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TRIM54Q9BYV2 358 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 TAGLN3Q9UI15 199 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 PRUNE2Q8WUY3 3088 aa19.47■□□□□ 0.71
TRIM47-204ENST00000587339 A0A1B0GTL3 188 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 TAPBPO15533 448 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 CRCPO75575 148 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 ESRRBO95718 433 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 PTPN4P29074 926 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 FOXA1P55317 472 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 KCNJ2P63252 427 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 MRPS21P82921 87 aaKnown RBP19.46■□□□□ 0.71
TRIM47-204ENST00000587339 IER5LQ5T953 404 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 KANK2Q63ZY3 851 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 C10orf67Q8IYJ2 551 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 PLA2G15Q8NCC3 412 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 LENG8Q96PV6 779 aaPredicted RBP19.46■□□□□ 0.71
TRIM47-204ENST00000587339 PARVBQ9HBI1 364 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 ARL15Q9NXU5 204 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 WWOXQ9NZC7 414 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 PDE10AQ9Y233 779 aa19.46■□□□□ 0.71
TRIM47-204ENST00000587339 PABPN1LA6NDY0 278 aaKnown RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ANXA5P08758 320 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HIST1H2AGP0C0S8 130 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HIST1H2ADP20671 130 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 COL9A1P20849 921 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HSPA7P48741 367 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 SP140Q13342 867 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GTF2H3Q13889 308 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 PNCKQ6P2M8 343 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 TRAPPC5Q8IUR0 188 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms