RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 CBX2Q14781 532 aaPredicted RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 DEFB128Q7Z7B8 93 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 RNF31Q96EP0 1072 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 MYPNQ86TC9 1320 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 PSKH1P11801 424 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 AMD1P17707 334 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 GPD2P43304 727 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 RPIAP49247 311 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 NOMO2Q5JPE7 1267 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 KIAA0930Q6ICG6 404 aaPredicted RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 CST11Q9H112 138 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 MAP4K5Q9Y4K4 846 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 AGLP35573 1532 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 COL1A2P08123 1366 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 PLOD2O00469 737 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SCN2BO60939 215 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ATG13O75143 517 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SERPINA3P01011 423 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 AMHP03971 560 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 HSPA7P48741 367 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ERVK-8P63133 956 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 CBLBQ13191 982 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 NMBRP28336 390 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 RPS14P62263 151 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 FOXM1Q08050 763 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 BNIP3Q12983 259 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 NPTX1Q15818 432 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 COLEC12Q5KU26 742 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 MED27Q6P2C8 311 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 TMEM126BQ8IUX1 230 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 FERD3LQ96RJ6 166 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 POLR2J2Q9GZM3 115 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 KIAA1522Q9P206 1035 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 ESR1P03372 595 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CHRNB2P17787 502 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ARF4P18085 180 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 AOC1P19801 751 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 XKRYO14609 159 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 NOBOXO60393 691 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CD48P09326 243 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ELFN1P0C7U0 828 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ASTE1Q2TB18 679 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 WSCD2Q2TBF2 565 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ART5Q96L15 291 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 H3BM21 787 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 AKAP8O43823 692 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 HCN1O60741 890 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 ACSL1P33121 698 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CAMK1Q14012 370 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 FRRS1Q6ZNA5 592 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 HID1Q8IV36 788 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CEP295NLQ96MC4 621 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 RUVBL1Q9Y265 456 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 TMED5Q9Y3A6 229 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 H3BSA7 217 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 PBX3P40426 434 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 SOHLH2Q9NX45 425 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
RNF43-208ENST00000584437 CLTCQ00610 1675 aaKnown RBP12.88□□□□□ -0.35
RNF43-208ENST00000584437 C9JVG2 144 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 E9PAM4 449 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 WRBO00258 174 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 GNRH1P01148 92 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 TAS2R39P59534 338 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 FAM174BQ3ZCQ3 159 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 ABHD15Q6UXT9 468 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms