RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.36■□□□□ 0.05
SKA2-209ENST00000583976 DDX47Q9H0S4 455 aaKnown RBP15.36■□□□□ 0.05
SKA2-209ENST00000583976 NFKBIL1Q9UBC1 381 aaPredicted RBP15.36■□□□□ 0.05
SKA2-209ENST00000583976 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
SKA2-209ENST00000583976 TP53TG5Q9Y2B4 290 aa15.36■□□□□ 0.05
SKA2-209ENST00000583976 USP9XQ93008 2570 aaPredicted RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 RGSL1A5PLK6 1076 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 E7EVH7 732 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 CHUKO15111 745 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 CAPN5O15484 640 aaPredicted RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 RASSF9O75901 435 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 URI1O94763 535 aaPredicted RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 KIAA0754O94854 1291 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 TIAF1O95411 115 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 VIPP01282 170 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 KRT14P02533 472 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 HLA-DPA1P20036 260 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 ADRA1AP35348 466 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 FDFT1P37268 417 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 CLCNKAP51800 687 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 BASP1P80723 227 aaKnown RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 GPR18Q14330 331 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 LACTB2Q53H82 288 aaPredicted RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 KCTD11Q693B1 232 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 RANBP10Q6VN20 620 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 FAM92BQ6ZTR7 304 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 LRRTM4Q86VH4 590 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 TRAM1L1Q8N609 369 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 BLOC1S5Q8TDH9 187 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 RUFY1Q96T51 708 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 GPR63Q9BZJ6 419 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 EPB41L1Q9H4G0 881 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 ZNF768Q9H5H4 540 aaKnown RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 TRIM39Q9HCM9 518 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 BPIFA1Q9NP55 256 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 PIH1D1Q9NWS0 290 aaKnown RBP15.35■□□□□ 0.05
SKA2-209ENST00000583976 ANKMY1Q9P2S6 941 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 RNF14Q9UBS8 474 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 WDR37Q9Y2I8 494 aa15.35■□□□□ 0.05
SKA2-209ENST00000583976 OR5K4A6NMS3 321 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 PSMD3O43242 534 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 ZNF7P17097 686 aaPredicted RBP15.34■□□□□ 0.05
SKA2-209ENST00000583976 CA5AP35218 305 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 FNTAP49354 379 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 MAP7Q14244 749 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 TMC3Q7Z5M5 1100 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 TRAPPC5Q8IUR0 188 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 GRK7Q8WTQ7 553 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 APOBEC4Q8WW27 367 aaKnown RBP15.34■□□□□ 0.05
SKA2-209ENST00000583976 LRRC45Q96CN5 670 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 TIMM29Q9BSF4 260 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 EFHD1Q9BUP0 239 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 LRRC40Q9H9A6 602 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 UCK1Q9HA47 277 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 MAGEE1Q9HCI5 957 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 LNPEPQ9UIQ6 1025 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 ANAPC2Q9UJX6 822 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 KCNMB2Q9Y691 235 aa15.34■□□□□ 0.05
SKA2-209ENST00000583976 TNRC6AQ8NDV7 1962 aaKnown RBP15.33■□□□□ 0.05
SKA2-209ENST00000583976 SPTAN1Q13813 2472 aaKnown RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 BUD23O43709 281 aaKnown RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 AP2A1O95782 977 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 APRTP07741 180 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 AMD1P17707 334 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 TPH1P17752 444 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 XRCC1P18887 633 aaPredicted RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 GPS1Q13098 491 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 SEMA5AQ13591 1074 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 ERV3-1Q14264 604 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 KCNAB1Q14722 419 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 PPP1R7Q15435 360 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 ATP13A5Q4VNC0 1218 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 IRGCQ6NXR0 463 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 C6orf15Q6UXA7 325 aaPredicted RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 PRSS42Q7Z5A4 293 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 C11orf96Q7Z7L8 435 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 RASGRP3Q8IV61 690 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 KLHDC8BQ8IXV7 354 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 AVL9Q8NBF6 648 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 TRIT1Q9H3H1 467 aaKnown RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 POT1Q9NUX5 634 aa15.33■□□□□ 0.04
SKA2-209ENST00000583976 FEZ2Q9UHY8 353 aaPredicted RBP15.33■□□□□ 0.04
SKA2-209ENST00000583976 UTP20O75691 2785 aaKnown RBP15.32■□□□□ 0.04
SKA2-209ENST00000583976 GPR89AB7ZAQ6 455 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
SKA2-209ENST00000583976 KMOO15229 486 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 DNAJB5O75953 348 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 GAS8O95995 478 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 PDGFAP04085 211 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 GPR89BP0CG08 455 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 GRIA1P42261 906 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 MC1RQ01726 317 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 DENND5AQ6IQ26 1287 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 DUS1LQ6P1R4 473 aaKnown RBP15.32■□□□□ 0.04
SKA2-209ENST00000583976 C4orf22Q6V702 233 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 CERS6Q6ZMG9 384 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 PPP1R21Q6ZMI0 780 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 GLT6D1Q7Z4J2 308 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms