RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 OR5AN1Q8NGI8 311 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CCL4L1Q8NHW4 92 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CALML6Q8TD86 181 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 LMX1AQ8TE12 382 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CXorf40AQ8TE69 158 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 ISG20Q96AZ6 181 aaKnown RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 CENPTQ96BT3 561 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 SLC7A6OSQ96CW6 309 aaPredicted RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 ZG16BQ96DA0 208 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 RNF31Q96EP0 1072 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 PDXPQ96GD0 296 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 NAF1Q96HR8 494 aaKnown RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 PPP1R16AQ96I34 528 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 FEM1CQ96JP0 617 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 APOLD1Q96LR9 279 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CSPG4P5Q96PW8 444 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 PPP1R9BQ96SB3 815 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CHP1Q99653 195 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 FOXB1Q99853 325 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 NCAPGQ9BPX3 1015 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 LRRC61Q9BV99 259 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CINPQ9BW66 212 aaPredicted RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 CLPBQ9H078 707 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 NAT10Q9H0A0 1025 aaKnown RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 ISCUQ9H1K1 167 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 SLC6A15Q9H2J7 730 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 GOLPH3Q9H4A6 298 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 CATSPERBQ9H7T0 1116 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 SYNDIG1Q9H7V2 258 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 NT5MQ9NPB1 228 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 MRPL40Q9NQ50 206 aaKnown RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 SPTLC3Q9NUV7 552 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 PARVAQ9NVD7 372 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 IPO11Q9UI26 975 aaKnown RBP3.98□□□□□ -1.77
DDX42-211ENST00000580108 ANAPC7Q9UJX3 599 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 HPCAL4Q9UM19 191 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 MYO6Q9UM54 1294 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 DAAM1Q9Y4D1 1078 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 PLEKHM1Q9Y4G2 1056 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 OR1A2Q9Y585 309 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 RAI2Q9Y5P3 530 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 ATRXP46100 2492 aa3.98□□□□□ -1.77
DDX42-211ENST00000580108 FREM2Q5SZK8 3169 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 BPTFQ12830 3046 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 SPTY2D1-AS1A0A0U1RR47 76 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TCRBV16S1A1N1A0A5B0 115 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TSPAN11A1L157 253 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TMEM202A6NGA9 273 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 ARHGAP42A6NI28 874 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 A6NNZ2 444 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 F5H423 210 aaPredicted RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 DVL2O14641 736 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 FPGTO14772 594 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TSPAN6O43657 245 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 AP1G1O43747 822 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 OPA1O60313 960 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 PALMO75781 387 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TM7SF2O76062 418 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 RNF8O76064 485 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TRIM16O95361 564 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 MT-CO3P00414 261 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 PRLP01236 227 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 SERPING1P05155 500 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 HLA-DQB2P05538 268 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 PDHA1P08559 390 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 ALPIP09923 528 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 GZMAP12544 262 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 KRT10P13645 584 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 JUPP14923 745 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TSHRP16473 764 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 CKMT2P17540 419 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TGM2P21980 687 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 LHCGRP22888 699 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 XPAP23025 273 aaPredicted RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 EIF2S3P41091 472 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 POLD2P49005 469 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 ADKP55263 362 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 CDH6P55285 790 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 RPS21P63220 83 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 ZBED6P86452 979 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 DSC2Q02487 901 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 GBE1Q04446 702 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 NIPAL4Q0D2K0 466 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 SLC10A2Q12908 348 aaPredicted RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 SRSF6Q13247 344 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 SGCGQ13326 291 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 MTA1Q13330 715 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 HNRNPDQ14103 355 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 DPYSL3Q14195 570 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 KRT81Q14533 505 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 MESDQ14696 234 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 SMAD1Q15797 465 aaKnown RBP3.97□□□□□ -1.77
DDX42-211ENST00000580108 CNGA3Q16281 694 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 DPYSL2Q16555 572 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 UGP2Q16851 508 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 PARP15Q460N3 678 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TMEM52BQ4KMG9 183 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 TMEM177Q53S58 311 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 C1QL3Q5VWW1 255 aa3.97□□□□□ -1.77
DDX42-211ENST00000580108 NCBP2-AS2Q69YL0 99 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms