RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TAAR9Q96RI9 348 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 INSM2Q96T92 566 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 PCDHGA7Q9Y5G6 932 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 DSPP15924 2871 aaKnown RBP12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 C17orf113A0A1B0GUU1 675 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 TCRBV7S3A2A0A539 114 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 PHF2O75151 1096 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 AP2A2O94973 939 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR56A5P0C7T3 313 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 TPSB2P20231 275 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 FOXN2P32314 431 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 CAPZBP47756 277 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 SEPHS1P49903 392 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 CXADRP78310 365 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 TLE3Q04726 772 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 BOP1Q14137 746 aaKnown RBP12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 ITIH4Q14624 930 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 PPP1R7Q15435 360 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 TPSAB1Q15661 275 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 ARMC6Q6NXE6 501 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 LRRC8BQ6P9F7 803 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 CERS6Q6ZMG9 384 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 ELMO1Q92556 727 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 RSC1A1Q92681 617 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 ZDHHC12Q96GR4 267 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 FERD3LQ96RJ6 166 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 COG4Q9H9E3 785 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 CATSPERZQ9NTU4 200 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 OCIAD1Q9NX40 245 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 RIMKLBQ9ULI2 386 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 PYCARDQ9ULZ3 195 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 HEBP2Q9Y5Z4 205 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 CFAP47Q6ZTR5 3102 aa12.68□□□□□ -0.38
CTDSPL2-209ENST00000560620 C9orf172C9J069 976 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 GOLGA8MH3BSY2 632 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CES2O00748 559 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CD3EAPO15446 510 aaKnown RBP12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR1I1O60431 355 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 AVILO75366 819 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 ITGB6P18564 788 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 NMBRP28336 390 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PREPP48147 710 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 LEPRP48357 1165 aaKnown RBP12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 UCNP55089 124 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 TMPRSS3P57727 454 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 ACVR1Q04771 509 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 FOXM1Q08050 763 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CYP1B1Q16678 543 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 DCAF12Q5T6F0 453 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CACHD1Q5VU97 1274 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CES3Q6UWW8 571 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PDZD3Q86UT5 571 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 ZFAND4Q86XD8 727 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PEX13Q92968 403 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 RMDN2Q96LZ7 410 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 FCRL3Q96P31 734 aaPredicted RBP12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 CTRCQ99895 268 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 TSSK1BQ9BXA7 367 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PDP2Q9P2J9 529 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PRSS21Q9Y6M0 314 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
CTDSPL2-209ENST00000560620 MN1Q10571 1320 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 CTAGE9A4FU28 777 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR6C74A6NCV1 312 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 NDUFS3O75489 264 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 VAPBO95292 243 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 GSTM1P09488 218 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 LIPCP11150 499 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PSMA3P25788 255 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 NDUFS1P28331 727 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PDHA2P29803 388 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 FNTAP49354 379 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 TTPAP49638 278 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ARL4DP49703 201 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 RAB15P59190 212 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 GSTM4Q03013 218 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 CLN3Q13286 438 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 TGIF1Q15583 401 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ARHGAP40Q5TG30 622 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ANKS6Q68DC2 871 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PTRHD1Q6GMV3 140 aaKnown RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PACS1Q6VY07 963 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 NAPRTQ6XQN6 538 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms