RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 DYNC1I1O14576 645 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 RAD1O60671 282 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 LIFP15018 202 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZNF28P17035 718 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 AMD1P17707 334 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ITGALP20701 1170 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 HALP42357 657 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 SEPT6Q14141 434 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 P3H1Q32P28 736 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 CCDC38Q502W7 563 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 EXD3Q8N9H8 876 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 EXTL1Q92935 676 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 WBP1Q96G27 269 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZNF514Q96K75 400 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 C19orf43Q9BQ61 176 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ASPSCR1Q9BZE9 553 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZNF768Q9H5H4 540 aaKnown RBP13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 FEZ2Q9UHY8 353 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
TNFAIP2-207ENST00000560562 LOC101059948A0A1B0GTJ6 334 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 DLGAP3O95886 979 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 PSMA3P25788 255 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 ACRV1P26436 265 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 HADHAP40939 763 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 GNG11P61952 73 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 PDE1BQ01064 536 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 SNX1Q13596 522 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 DBN1Q16643 649 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZRANB3Q5FWF4 1079 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CAPRIN2Q6IMN6 1127 aaKnown RBP13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 IRGCQ6NXR0 463 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CEACAM20Q6UY09 585 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 PRSS42Q7Z5A4 293 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 SERPINA9Q86WD7 417 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 RBM12BQ8IXT5 1001 aaKnown RBP13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 UNC5BQ8IZJ1 945 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CLDN19Q8N6F1 224 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 ULK4Q96C45 1275 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 C12orf66Q96MD2 445 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 COPS8Q99627 209 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 SLC12A9Q9BXP2 914 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 EPHA6Q9UF33 1036 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 TMEM184BQ9Y519 407 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 PRSS21Q9Y6M0 314 aa13.68□□□□□ -0.22
TNFAIP2-207ENST00000560562 CCDC88CQ9P219 2028 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 IGHV5-51A0A0C4DH38 117 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 RASSF9O75901 435 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 STK17BO94768 372 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 IFNB1P01574 187 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 POLBP06746 335 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZSCAN5DPP0CG00 497 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 ATP1B2P14415 290 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 FOXM1Q08050 763 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 CACHD1Q5VU97 1274 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 CFAP206Q8IYR0 622 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 IL22RA1Q8N6P7 574 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 KLHL6Q8WZ60 621 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 PPM1MQ96MI6 270 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZNF778Q96MU6 729 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 TEFMQ96QE5 360 aaKnown RBP13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 RAB33BQ9H082 229 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 ZDHHC3Q9NYG2 299 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 SEMA5BQ9P283 1151 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 SLC24A2Q9UI40 661 aa13.67□□□□□ -0.22
TNFAIP2-207ENST00000560562 MED13Q9UHV7 2174 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 CCDC162PA2VCL2 907 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 TOX3O15405 576 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 KIF5CO60282 957 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 SUN1O94901 812 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 TIAF1O95411 115 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 PDHA2P29803 388 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 FOXN2P32314 431 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 ARCN1P48444 511 aaKnown RBP13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 ATP1A2P50993 1020 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 PLCL1Q15111 1095 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 NLGN4XQ8N0W4 816 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 NLGN4YQ8NFZ3 816 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 STYXQ8WUJ0 223 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 DCUN1D1Q96GG9 259 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 ELMO2Q96JJ3 720 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 OR6C1Q96RD1 312 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 MAP3K3Q99759 626 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
TNFAIP2-207ENST00000560562 COG4Q9H9E3 785 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms