RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AMZ2Q86W34 360 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 PPP1R3BQ86XI6 285 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TRAPPC5Q8IUR0 188 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 RASGRP3Q8IV61 690 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 RHOT1Q8IXI2 618 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 DDHD1Q8NEL9 900 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SPATA22Q8NHS9 363 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SLC35G2Q8TBE7 412 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SEC14L1Q92503 715 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 UBXN4Q92575 508 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 VAT1Q99536 393 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 ZNHIT6Q9NWK9 470 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 DDX56Q9NY93 547 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
NEK3-201ENST00000550331 HACD3Q9P035 362 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 FAM153AQ9UHL3 310 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TMPRSS11EQ9UL52 423 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 POLHQ9Y253 713 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 WDR37Q9Y2I8 494 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SPO11Q9Y5K1 396 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MRPS18BQ9Y676 258 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 C2CD3Q4AC94 2353 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 ESPL1Q14674 2120 aa7.46□□□□□ -1.21
NEK3-201ENST00000550331 LOC285095A0A1B0GVY8 99 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 KLHL33A6NCF5 533 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 C21orf140B9A014 251 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 KIF1CO43896 1103 aaKnown RBP7.46□□□□□ -1.22
NEK3-201ENST00000550331 PMPCBO75439 489 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 HLA-DPA1P20036 260 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 SPAM1P38567 509 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 PMS2P54278 862 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 DRG2P55039 364 aaKnown RBP7.46□□□□□ -1.22
NEK3-201ENST00000550331 ACY1Q03154 408 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TUBB3Q13509 450 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 DNASE1L3Q13609 305 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 ITGA9Q13797 1035 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TCEAL1Q15170 157 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TAZQ16635 292 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 SIRPB2Q5JXA9 342 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 LDLRAP1Q5SW96 308 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TCTN3Q6NUS6 607 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 IRGCQ6NXR0 463 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 KDELC1Q6UW63 502 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 MFSD7Q6UXD7 560 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 NPNTQ6UXI9 565 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 FAM92BQ6ZTR7 304 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 KMT5CQ86Y97 462 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 RFX6Q8HWS3 928 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 APLFQ8IW19 511 aaPredicted RBP7.46□□□□□ -1.22
NEK3-201ENST00000550331 TTC30BQ8N4P2 665 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 GDAP1Q8TB36 358 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TFB1MQ8WVM0 346 aaKnown RBP7.46□□□□□ -1.22
NEK3-201ENST00000550331 ELMO2Q96JJ3 720 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 SLC41A2Q96JW4 573 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TTC25Q96NG3 672 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 CD180Q99467 661 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 PDE7BQ9NP56 450 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 IL26Q9NPH9 171 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 LHX9Q9NQ69 397 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 ABHD10Q9NUJ1 306 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 SMOXQ9NWM0 555 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 UBP1Q9NZI7 540 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 LNPEPQ9UIQ6 1025 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 RARRES3Q9UL19 164 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 PADI1Q9ULC6 663 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 INTUQ9ULD6 942 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 SRPK3Q9UPE1 567 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 TP53TG5Q9Y2B4 290 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 PKP3Q9Y446 797 aa7.46□□□□□ -1.22
NEK3-201ENST00000550331 LRBAP50851 2863 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 GLYATL1P3A0A0U1RQE8 302 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 OR5K3A6NET4 321 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 TLCD2A6NGC4 264 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 PSTPIP1O43586 416 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 SPOPO43791 374 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 KATNA1O75449 491 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 CREG1O75629 220 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 RFPL1O75677 317 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 POP7O75817 140 aaKnown RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 TPM1P09493 284 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 NFKB1P19838 968 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
NEK3-201ENST00000550331 CDKN2BP42772 138 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 CD97P48960 835 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 CTSCP53634 463 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 MLLT10P55197 1068 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 WNT3AP56704 352 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 DYNLT1P63172 113 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 WASHC5Q12768 1159 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 MPP3Q13368 585 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 ERV3-1Q14264 604 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 SLC1A5Q15758 541 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 RPE65Q16518 533 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 PPP2R5EQ16537 467 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 LONRF2Q1L5Z9 754 aa7.45□□□□□ -1.22
NEK3-201ENST00000550331 FAM182AQ5T1J6 154 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms