RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 KRT33BQ14525 404 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 TCTN3Q6NUS6 607 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 CNGA4Q8IV77 575 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 KATNAL2Q8IYT4 538 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 LILRA3Q8N6C8 439 aaPredicted RBP19.87■□□□□ 0.77
SSH1-207ENST00000547862 KRT35Q92764 455 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 MIB2Q96AX9 1013 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 CD180Q99467 661 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 FAM118BQ9BPY3 351 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 GORASP1Q9BQQ3 440 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 CRLS1Q9UJA2 301 aa19.87■□□□□ 0.77
SSH1-207ENST00000547862 MGAT4DA6NG13 374 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 ARGFXA6NJG6 315 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 HACD1B0YJ81 288 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 SPTBP11277 2137 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 POLR2CP19387 275 aaPredicted RBP19.86■□□□□ 0.77
SSH1-207ENST00000547862 LPOP22079 712 aaPredicted RBP19.86■□□□□ 0.77
SSH1-207ENST00000547862 PSMB4P28070 264 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 MAGEA1P43355 309 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 KPNA2P52292 529 aaKnown RBP19.86■□□□□ 0.77
SSH1-207ENST00000547862 HSD11B2P80365 405 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 PDE1BQ01064 536 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 METRNLQ641Q3 311 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 ATCAYQ86WG3 371 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 RBM41Q96IZ5 413 aaKnown RBP19.86■□□□□ 0.77
SSH1-207ENST00000547862 TLR10Q9BXR5 811 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 TSPY26PQ9H489 355 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 FAM96AQ9H5X1 160 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 SLC24A2Q9UI40 661 aa19.86■□□□□ 0.77
SSH1-207ENST00000547862 DNMT3AQ9Y6K1 912 aaPredicted RBP19.86■□□□□ 0.77
SSH1-207ENST00000547862 C2orf81A6NN90 581 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 SRP72O76094 671 aaKnown RBP19.85■□□□□ 0.77
SSH1-207ENST00000547862 CDH3P22223 829 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 PTPN4P29074 926 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 RPS15P62841 145 aaKnown RBP19.85■□□□□ 0.77
SSH1-207ENST00000547862 GPS2Q13227 327 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 TAF1AQ15573 450 aaPredicted RBP19.85■□□□□ 0.77
SSH1-207ENST00000547862 PRAMEF17Q5VTA0 474 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 ITPRIPL1Q6GPH6 555 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 MICALCLQ6ZW33 695 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 KMT5CQ86Y97 462 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 RCOR2Q8IZ40 523 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 OR13C4Q8NGS5 318 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 OR2L2Q8NH16 312 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 DTX3LQ8TDB6 740 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 DCUN1D1Q96GG9 259 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 SEMA5BQ9P283 1151 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 TRHDEQ9UKU6 1024 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
SSH1-207ENST00000547862 MED13Q9UHV7 2174 aa19.85■□□□□ 0.77
SSH1-207ENST00000547862 LRRK2Q5S007 2527 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 PIKFYVEQ9Y2I7 2098 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 GSAPA4D1B5 854 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 CCL22O00626 93 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 ANXA9O76027 345 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 ZBTB11O95625 1053 aaPredicted RBP19.84■□□□□ 0.77
SSH1-207ENST00000547862 ATXN8OSP0DMR3 200 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 CTNNA2P26232 953 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 TUBB4BP68371 445 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 PRKAA1Q13131 559 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 SEMA5AQ13591 1074 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 TUBB2AQ13885 445 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 TCEAL1Q15170 157 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 UGT8Q16880 541 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 TMTC4Q5T4D3 741 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 FAM69BQ5VUD6 431 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 CFAP206Q8IYR0 622 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 D2HGDHQ8N465 521 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 OR4E2Q8NGC2 313 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 TUBB2BQ9BVA1 445 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 KIR3DX1Q9H7L2 352 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 FANCEQ9HB96 536 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 ACSS2Q9NR19 701 aa19.84■□□□□ 0.77
SSH1-207ENST00000547862 APOC4-APOC2K7ER74 178 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 LCA5LO95447 670 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 APOC2P02655 101 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 UQCRFS1P47985 274 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 CCL11P51671 97 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 OTUD4Q01804 1114 aaKnown RBP19.83■□□□□ 0.77
SSH1-207ENST00000547862 BCL7AQ4VC05 210 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 BBS12Q6ZW61 710 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 SYVN1Q86TM6 617 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 CDKL3Q8IVW4 592 aaPredicted RBP19.83■□□□□ 0.77
SSH1-207ENST00000547862 FAM26EQ8N5C1 309 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 ACTL9Q8TC94 416 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 HM13Q8TCT9 377 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 ZNF501Q96CX3 271 aaPredicted RBP19.83■□□□□ 0.77
SSH1-207ENST00000547862 FCRL4Q96PJ5 515 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 NRTNQ99748 197 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 SLC25A23Q9BV35 468 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 KLHL25Q9H0H3 589 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 CHST8Q9H2A9 424 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 KCND1Q9NSA2 647 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 ACSL5Q9ULC5 683 aa19.83■□□□□ 0.77
SSH1-207ENST00000547862 BLACEA4D250 179 aa19.82■□□□□ 0.76
SSH1-207ENST00000547862 SLC9B1P1A6NJY1 282 aa19.82■□□□□ 0.76
SSH1-207ENST00000547862 TTLL8A6PVC2 850 aa19.82■□□□□ 0.76
SSH1-207ENST00000547862 KCNN4O15554 427 aa19.82■□□□□ 0.76
SSH1-207ENST00000547862 RALBP11234 206 aa19.82■□□□□ 0.76
SSH1-207ENST00000547862 ITGALP20701 1170 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms