RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	PPP1R2P1	Q96PQ5	205 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	EBPL	Q9BY08	206 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	TRIM54	Q9BYV2	358 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	TFB2M	Q9H5Q4	396 aa	Known RBP	12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	ABCB10	Q9NRK6	738 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	AIG1	Q9NVV5	245 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	SEPT3	Q9UH03	358 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	CRLS1	Q9UJA2	301 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	PCDHA9	Q9Y5H5	950 aa		12.8	□□□□□ -0.36
BRF1-210	ENST00000547374	C16orf96	A6NNT2	1141 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	AXIN1	O15169	862 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	GJB5	O95377	273 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	SERPINA1	P01009	418 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	HK3	P52790	923 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	RHOA	P61586	193 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PSMA8	Q8TAA3	256 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PDE10A	Q9Y233	779 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	EIF3L	Q9Y262	564 aa	Known RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	GON4L	Q3T8J9	2241 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ACOX3	O15254	700 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	SLC25A14	O95258	325 aa	Predicted RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	MLYCD	O95822	493 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PIM1	P11309	404 aa	Predicted RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	HSD17B1	P14061	328 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	CBLB	Q13191	982 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	SF1	Q15637	639 aa	Known RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	TRIP4	Q15650	581 aa	Predicted RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF621	Q6ZSS3	439 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	UMODL1-AS1	Q8N2C9	162 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	TBC1D15	Q8TC07	691 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	HPS1	Q92902	700 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	TLR9	Q9NR96	1032 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	NEU3	Q9UQ49	428 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF451	Q9Y4E5	1061 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF646	O15015	1829 aa	Predicted RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	LOC100506127	A0A0U1RQW1	187 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ULK1	O75385	1050 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PRAMEF12	O95522	483 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	AKR1A1	P14550	325 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	GTF2H2	Q13888	395 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	INTS11	Q5TA45	600 aa	Known RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ANKRD26P1	Q6NSI1	321 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	GTF2H2C	Q6P1K8	395 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374		Q6ZSR9	355 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	CROCCP3	Q8IVE0	287 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	HS6ST3	Q8IZP7	471 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	NKAP	Q8N5F7	415 aa	Known RBP	12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	ASB2	Q96Q27	587 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	RHNO1	Q9BSD3	238 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	HPS4	Q9NQG7	708 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	PCTP	Q9UKL6	214 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374	TSC22D4	Q9Y3Q8	395 aa		12.79	□□□□□ -0.36
BRF1-210	ENST00000547374		H0Y858	1186 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374		K7ERQ8	282 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	PEX11B	O96011	259 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	GLUD1	P00367	558 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ELN	P15502	786 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	TGFBR1	P36897	503 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	CLK1	P49759	484 aa	Known RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	PLA2G16	P53816	162 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	BOP1	Q14137	746 aa	Known RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	NFE2	Q16621	373 aa	Predicted RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	AFTPH	Q6ULP2	937 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	OR7A2P	Q8NGA2	310 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ASIC4	Q96FT7	647 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF599	Q96NL3	588 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	HERC2P3	Q9BVR0	1158 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	IKZF5	Q9H5V7	419 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	INTS10	Q9NVR2	710 aa	Known RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	WDR70	Q9NW82	654 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	PADI4	Q9UM07	663 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	MTX2	O75431	263 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	FUCA1	P04066	466 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	OPRL1	P41146	370 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	IL10RB	Q08334	325 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	SPCS2	Q15005	226 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	CRY1	Q16526	586 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	SMN1	Q16637	294 aa	Known RBP	12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	POM121L1P	Q3SYA9	428 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	BORA	Q6PGQ7	559 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	PLD3	Q8IV08	490 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	EID3	Q8N140	333 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF540	Q8NDQ6	660 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	RORB	Q92753	470 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	UBE2F	Q969M7	185 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ITFG2	Q969R8	447 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ACD	Q96AP0	544 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	FUNDC2	Q9BWH2	189 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ATG10	Q9H0Y0	220 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	OPTC	Q9UBM4	332 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	TRIM17	Q9Y577	477 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	MROH6	A6NGR9	719 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	INSIG1	O15503	277 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ITPKA	P23677	461 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	ZXDB	P98169	803 aa		12.78	□□□□□ -0.36
BRF1-210	ENST00000547374	CD47	Q08722	323 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms