RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 INPP4BO15327 924 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CLOCKO15516 846 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ACSL4O60488 711 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TPST1O60507 370 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TLR5O60602 858 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TULP3O75386 442 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CRCPO75575 148 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CPNE6O95741 557 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CHEK2O96017 543 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 LDLRP01130 860 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 HMBSP08397 361 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CDH1P12830 882 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 JUNBP17275 347 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 LPOP22079 712 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 OR1G1P47890 313 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 RPIAP49247 311 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TTPAP49638 278 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CDKN1CP49918 316 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 HLCSP50747 726 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 KCNQ1P51787 676 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CLCN7P51798 805 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CDH4P55283 916 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 OR4D2P58180 307 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ERVPABLB-1P60509 514 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 IL2P60568 153 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ESRRGP62508 458 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 SMARCB1Q12824 385 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CLN3Q13286 438 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 GPR17Q13304 367 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 MBTPS1Q14703 1052 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 KIAA0040Q15053 153 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 PCBP2Q15366 365 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 KCNA10Q16322 511 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CTXN3Q4LDR2 81 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 MFSD14CQ5VZR4 134 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 PSAPL1Q6NUJ1 521 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ABRAXAS1Q6UWZ7 409 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 FKBP9P1Q75LS8 142 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 GLT6D1Q7Z4J2 308 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 GPSM1Q86YR5 675 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 GALNT13Q8IUC8 556 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CROCCP3Q8IVE0 287 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 LGI2Q8N0V4 545 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CFAP52Q8N1V2 620 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 SFRP1Q8N474 314 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 DHRSXQ8N5I4 330 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TERB1Q8NA31 727 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 SIDT2Q8NBJ9 832 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 PDPRQ8NCN5 879 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 PNPT1Q8TCS8 783 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 EEF1AKMT1Q8WVE0 214 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 C12orf43Q96C57 262 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 FBXL20Q96IG2 436 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TMEM74Q96NL1 305 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CCDC115Q96NT0 180 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ACOX2Q99424 681 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TUBA1CQ9BQE3 449 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CINPQ9BW66 212 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 OSBPL6Q9BZF3 934 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TRIM8Q9BZR9 551 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 P2RY12Q9H244 342 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CCDC68Q9H2F9 335 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 LIN28AQ9H9Z2 209 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 INTS7Q9NVH2 962 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 RIC8BQ9NVN3 520 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 GALNT8Q9NY28 637 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 NUDT4Q9NZJ9 180 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 UBA2Q9UBT2 640 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 EBF1Q9UH73 591 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TRMT6Q9UJA5 497 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 CCL27Q9Y4X3 112 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ASB1Q9Y576 335 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 TRIM17Q9Y577 477 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ACTL7AQ9Y615 435 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 ZFC3H1O60293 1989 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ILVBLA1L0T0 632 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ANKRD66B4E2M5 251 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OR7A17O14581 309 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 LSM1O15116 133 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PFDN6O15212 129 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OR1I1O60431 355 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 SYNCRIPO60506 623 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 NIPSNAP2O75323 286 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CLDN11O75508 207 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OR4F21O95013 312 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 CD160O95971 181 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 HPRP00739 348 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ESR1P03372 595 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 ADH1AP07327 375 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 COL6A1P12109 1028 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 NCK1P16333 377 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 GGT1P19440 569 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 JAK1P23458 1154 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 MC4RP32245 332 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PTGER3P43115 390 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 OXCT1P55809 520 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PRKG2Q13237 762 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PMS2P3Q13401 168 aa5.11□□□□□ -1.59
ATPAF1-212ENST00000542495 PWP1Q13610 501 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms