RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 YAF2Q8IY57 180 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 FAM9CQ8IZT9 166 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CENPLQ8N0S6 344 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 DEFB106AQ8N104 65 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SCML4Q8N228 414 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CCDC185Q8N715 623 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CSGALNACT1Q8TDX6 532 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 KCTD4Q8WVF5 259 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 IRF7Q92985 503 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 VPS33AQ96AX1 596 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 FUBP3Q96I24 572 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHFR-219ENST00000541341 GPR78Q96P69 363 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 NELL2Q99435 816 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SLC29A1Q99808 456 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 KCTD14Q9BQ13 255 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 ERVK-6Q9BXR3 956 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 OSBPL2Q9H1P3 480 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SYTL2Q9HCH5 934 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TRPV5Q9NQA5 729 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ASAH2Q9NR71 780 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ZNF358Q9NW07 568 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 COMMD8Q9NX08 183 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 IFT80Q9P2H3 777 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 EBF1Q9UH73 591 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 C3orf18Q9UK00 162 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 FBXO5Q9UKT4 447 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 UGT2A1Q9Y4X1 527 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 YIPF1Q9Y548 306 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 PCDHGB1Q9Y5G3 927 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 A3GALT2U3KPV4 340 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SDK1Q7Z5N4 2213 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 NUP205Q92621 2012 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 MYBPHLA2RUH7 354 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 MTMR11A4FU01 709 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 H0Y626 953 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 M0QYT0 321 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 SOCS2O14508 198 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 GDF9O60383 454 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TRIM16O95361 564 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 MLYCDO95822 493 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 AHSGP02765 367 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 UGT2B4P06133 528 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ENO2P09104 434 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 CCDC159P0C7I6 412 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RAP2AP10114 183 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TDGF1P13385 188 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 LCP1P13796 627 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ERCC2P18074 760 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ITIH1P19827 911 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 GPX3P22352 226 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TGM1P22735 817 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CD40LGP29965 261 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 HOXD12P35452 270 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 MAGEA11P43364 429 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PXNP49023 591 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 BMXP51813 675 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CXCR4P61073 352 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 IRF9Q00978 393 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CHRNB3Q05901 458 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 SEMA3BQ13214 749 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PMS2P3Q13401 168 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PEX6Q13608 980 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 OXA1LQ15070 435 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PON2Q15165 354 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 FXNQ16595 210 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CYP51A1Q16850 503 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 SMU1Q2TAY7 513 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 DCAF6Q58WW2 860 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ATAD3BQ5T9A4 648 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 EGFLAMQ63HQ2 1017 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 HMBOX1Q6NT76 420 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 NEPROQ6NW34 567 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PAQR9Q6ZVX9 377 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RTL10Q7L3V2 364 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ANKRD13BQ86YJ7 626 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ZDHHC13Q8IUH4 622 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PARP8Q8N3A8 854 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RNF148Q8N7C7 305 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TTC16Q8NEE8 873 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PDZD8Q8NEN9 1154 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 AGR3Q8TD06 166 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 DNASE1L2Q92874 299 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 HDAC10Q969S8 669 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ACDQ96AP0 544 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TMIGD2Q96BF3 282 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 NXNL1Q96CM4 212 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 LRRC58Q96CX6 371 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 MFSD3Q96ES6 412 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PCED1BQ96HM7 432 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 UBXN10Q96LJ8 280 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 NSMCE2Q96MF7 247 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms