RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ADRA1AP35348 466 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 ARL4DP49703 201 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 GEMP55040 296 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 HSD11B2P80365 405 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 KLRB1Q12918 225 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 TAF1AQ15573 450 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SKOR2Q2VWA4 1001 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 BCL7AQ4VC05 210 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 RANBP10Q6VN20 620 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 BPHLQ86WA6 291 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 OOSP2Q86WS3 158 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 D2HGDHQ8N465 521 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 TC2NQ8N9U0 490 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 OR4K2Q8NGD2 314 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 LINC00615Q96LM1 132 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 RMDN2Q96LZ7 410 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 C12orf66Q96MD2 445 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 RUFY1Q96T51 708 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 ACTL8Q9H568 366 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 KIR3DX1Q9H7L2 352 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 AKIRIN1Q9H9L7 192 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 FGF21Q9NSA1 209 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 HRASLS2Q9NWW9 162 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SLC24A2Q9UI40 661 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 ACSL5Q9ULC5 683 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 PIPSLA2A3N6 862 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 C2orf81A6NN90 581 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 AGAP14A8MT82 685 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 H7C0C1 242 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 CPNE3O75131 537 aaKnown RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 ATP5OP48047 213 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 TUBB4BP68371 445 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 XIAPP98170 497 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 OTUD4Q01804 1114 aaKnown RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 OLIG2Q13516 323 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 TUBB2AQ13885 445 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 CARFQ8N187 725 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 ZFPM2Q8WW38 1151 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 APOL2Q9BQE5 337 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 TUBB2BQ9BVA1 445 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 GPR87Q9BY21 358 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 ASB8Q9H765 288 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 SRPK3Q9UPE1 567 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
VAMP1-206ENST00000538970 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
VAMP1-206ENST00000538970 MACROD2A1Z1Q3 448 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 OR6C74A6NCV1 312 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PJA2O43164 708 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 SCRG1O75711 98 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 DNAJB5O75953 348 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ZBTB11O95625 1053 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PYGMP11217 842 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PSMB4P28070 264 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PTPN4P29074 926 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PRLHRP49683 370 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 KPNA2P52292 529 aaKnown RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 COPS2P61201 443 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 RPS18P62269 152 aaKnown RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 SEMA5AQ13591 1074 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 GPR19Q15760 415 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 UGT8Q16880 541 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 CCDC181Q5TID7 509 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ANKRD20A3Q5VUR7 823 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ASB18Q6ZVZ8 466 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 DAAM2Q86T65 1068 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 CDKL3Q8IVW4 592 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 APLFQ8IW19 511 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 LILRA3Q8N6C8 439 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 OR13C4Q8NGS5 318 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 SEC14L1Q92503 715 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 MIB2Q96AX9 1013 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 ZNF501Q96CX3 271 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PPM1MQ96MI6 270 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 TRIM55Q9BYV6 548 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 CRLS1Q9UJA2 301 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 TLK1Q9UKI8 766 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 PLAAQ9Y263 795 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 BTRCQ9Y297 605 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
VAMP1-206ENST00000538970 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
VAMP1-206ENST00000538970 CRTAMO95727 393 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 PDGFAP04085 211 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms