RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM126BQ8IXS8 530 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 EFCAB9A8MZ26 197 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 CCNKO75909 580 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 LGALS2P05162 132 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 SPNP16150 400 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 PAX3P23760 479 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 CXCR2P25025 360 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 VGLL4Q14135 290 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 COLEC12Q5KU26 742 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 CTU1Q7Z7A3 348 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 TMEM179BQ7Z7N9 219 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 SYVN1Q86TM6 617 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 STAG3L4Q8TBR4 150 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 SLC25A51Q9H1U9 297 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 DCSTAMPQ9H295 470 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 NXF3Q9H4D5 531 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 ACOT13Q9NPJ3 140 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 OPTCQ9UBM4 332 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 FBXO10Q9UK96 956 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 UTS2RQ9UKP6 389 aa18.33■□□□□ 0.52
SFSWAP-207ENST00000538548 OR51F1A6NGY5 319 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 USP2O75604 605 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 MT-ND2P03891 347 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 PGK2P07205 417 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 FCGRTP55899 365 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 PPP1R8Q12972 351 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 TXNDC11Q6PKC3 985 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 SCIMPQ6UWF3 145 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 HIPK1Q86Z02 1210 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 CCDC103Q8IW40 242 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 SULF1Q8IWU6 871 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 OR52E4Q8NGH9 312 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 ATL1Q8WXF7 558 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 CCNB1IP1Q9NPC3 277 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 IL37Q9NZH6 218 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 PNMA8BQ9ULN7 279 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 RNF112Q9ULX5 631 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 PCDHB14Q9Y5E9 798 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 HSPE1-MOB4S4R3N1 261 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 NOTOA8MTQ0 251 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 IFRD1O00458 451 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 SCO2O43819 266 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 MRPS14O60783 128 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 FADS2O95864 444 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 SLC2A3P11169 496 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 CD36P16671 472 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 CYP2C18P33260 490 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 TRAF3Q13114 568 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 TAC4Q86UU9 113 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF548Q8NEK5 533 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 OR7G1Q8NGA0 311 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 RHBDF1Q96CC6 855 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 SIK2Q9H0K1 926 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 MARCH7Q9H992 704 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF225Q9UK10 706 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 NEUROG3Q9Y4Z2 214 aa18.32■□□□□ 0.52
SFSWAP-207ENST00000538548 METTL15A6NJ78 407 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 RGS10O43665 173 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 AKAP5P24588 427 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 TGFBR1P36897 503 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 TGFBR2P37173 567 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 LILRA4P59901 499 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 HABP4Q5JVS0 413 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 PNCKQ6P2M8 343 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 GAD1Q99259 594 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 ACOX2Q99424 681 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 SMOQ99835 787 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 DKK3Q9UBP4 350 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 A3GALT2U3KPV4 340 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 PDCD11Q14690 1871 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 COL1A2P08123 1366 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 FGF10O15520 208 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 MLYCDO95822 493 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 UGT2B10P36537 528 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 FBXO48Q5FWF7 155 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 TTC23LQ6PF05 361 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 CCBE1Q6UXH8 406 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 SNX18Q96RF0 628 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 C1QTNF3Q9BXJ4 246 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 CATSPERBQ9H7T0 1116 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 ELP3Q9H9T3 547 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 HEBP1Q9NRV9 189 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 NPAP1Q9NZP6 1156 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 TBC1D14Q9P2M4 693 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 INVSQ9Y283 1065 aa18.31■□□□□ 0.52
SFSWAP-207ENST00000538548 MCM3APO60318 1980 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 HOXC11O43248 304 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 MSH3P20585 1137 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 HUNKP57058 714 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF45Q02386 682 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 TTLL4Q14679 1199 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 AGAP6Q5VW22 663 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 CAPN13Q6MZZ7 669 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms