RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CAND1Q86VP6 1230 aaKnown RBP15.49■□□□□ 0.07
TSKU-204ENST00000533752 CLDN19Q8N6F1 224 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 AGBL5Q8NDL9 886 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 ZNF248Q8NDW4 579 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 NCSTNQ92542 709 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 PRR11Q96HE9 360 aaPredicted RBP15.49■□□□□ 0.07
TSKU-204ENST00000533752 C12orf66Q96MD2 445 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 PCDHGA7Q9Y5G6 932 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 COLEC10Q9Y6Z7 277 aa15.49■□□□□ 0.07
TSKU-204ENST00000533752 A0A087WV48 116 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 FAM237BA0A1B0GVD1 139 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 CDRT15L2A8MXV6 281 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 CD3EAPO15446 510 aaKnown RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 POLBP06746 335 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 HOXB3P14651 431 aaPredicted RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 AMD1P17707 334 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 NMBRP28336 390 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 MAGEA3P43357 314 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 CD151P48509 253 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 CFHR1Q03591 330 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 PLCL1Q15111 1095 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 ZNF658BQ4V348 819 aaPredicted RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 RNF187Q5TA31 235 aaPredicted RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 CAPRIN2Q6IMN6 1127 aaKnown RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 LRRC69Q6ZNQ3 347 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 SDCCAG8Q86SQ7 713 aaPredicted RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 HOOK3Q86VS8 718 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 LRRC6Q86X45 466 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 NAT8LQ8N9F0 302 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 GPR150Q8NGU9 434 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 NAT14Q8WUY8 206 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 B3GNT4Q9C0J1 378 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 PISDQ9UG56 409 aa15.48■□□□□ 0.07
TSKU-204ENST00000533752 URB1O60287 2271 aaKnown RBP15.48■□□□□ 0.07
TSKU-204ENST00000533752 GOLGA8MH3BSY2 632 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 SMAPO00193 183 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 DNALI1O14645 258 aaPredicted RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 PRMT5O14744 637 aaPredicted RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 TOX3O15405 576 aaPredicted RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 TLX3O43711 291 aaPredicted RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 ANKRD34CP0C6C1 535 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 CASQ1P31415 396 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 DR1Q01658 176 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 DHX34Q14147 1143 aaKnown RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 KRT33BQ14525 404 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 C16orf72Q14CZ0 275 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 SYTL3Q4VX76 610 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 RNASEH2BQ5TBB1 312 aaKnown RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 TMEM164Q5U3C3 297 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 XKR5Q6UX68 686 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 KLHL7Q8IXQ5 586 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 RCBTB1Q8NDN9 531 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 ELMO1Q92556 727 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 MFSD3Q96ES6 412 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 ZDHHC12Q96GR4 267 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 INSM2Q96T92 566 aaPredicted RBP15.47■□□□□ 0.07
TSKU-204ENST00000533752 RAB33BQ9H082 229 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 OR52A5Q9H2C5 316 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 KIR3DX1Q9H7L2 352 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 TMEM9Q9P0T7 183 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 GNPTGQ9UJJ9 305 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 VPS9D1Q9Y2B5 631 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 PRSS21Q9Y6M0 314 aa15.47■□□□□ 0.07
TSKU-204ENST00000533752 KIF26BQ2KJY2 2108 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 NDC80O14777 642 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 NVLO15381 856 aaKnown RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 OR1I1O60431 355 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 AVILO75366 819 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 NDUFS3O75489 264 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 VAPBO95292 243 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 C9P02748 559 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 HGFP14210 728 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 TYRP1P17643 537 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 OGNP20774 298 aaKnown RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 CD82P27701 267 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 EIF2S3P41091 472 aaKnown RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 PTGIRP43119 386 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 RAB15P59190 212 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 SEMA3AQ14563 771 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 KCTD19Q17RG1 926 aaPredicted RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 DNAJC21Q5F1R6 531 aaKnown RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 MICALCLQ6ZW33 695 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 PDZD3Q86UT5 571 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 JAMLQ86YT9 394 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 LILRA3Q8N6C8 439 aaPredicted RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 DCBLD2Q96PD2 775 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 PANX3Q96QZ0 392 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 TCF12Q99081 682 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 MVB12BQ9H7P6 319 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 OGFRQ9NZT2 677 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 MARCH4Q9P2E8 410 aaPredicted RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 EPHA6Q9UF33 1036 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 ACSL6Q9UKU0 697 aa15.46■□□□□ 0.07
TSKU-204ENST00000533752 CFAP20Q9Y6A4 193 aaKnown RBP15.46■□□□□ 0.07
TSKU-204ENST00000533752 ZZEF1O43149 2961 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms