RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 SMPD4Q9NXE4 827 aa8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 TUBA8Q9NY65 449 aaPredicted RBP8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 ANAPC2Q9UJX6 822 aa8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 FNDC3AQ9Y2H6 1198 aaKnown RBP8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 SLC30A1Q9Y6M5 507 aa8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 PLXNB3Q9ULL4 1909 aa8.16□□□□□ -1.1
TRIM53BP-201ENST00000532912 KANSL1LA0AUZ9 987 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 H0Y626 953 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 IFRD1O00458 451 aaPredicted RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 EI24O14681 340 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 GIPC1O14908 333 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SMAD6O43541 496 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 OTCP00480 354 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SOD2P04179 222 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 MBL2P11226 248 aaPredicted RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 ZNF7P17097 686 aaPredicted RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 BPIP17213 487 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 MSH3P20585 1137 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 ACRV1P26436 265 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 VARSP26640 1264 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CSNK1DP48730 415 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CDK9P50750 372 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CDH15P55291 814 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 NFATC2Q13469 925 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CRY1Q16526 586 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 PHKG1Q16816 387 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SMU1Q2TAY7 513 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 FUT11Q495W5 492 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CYBRD1Q53TN4 286 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 IL27RAQ6UWB1 636 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 FAM151BQ6UXP7 276 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 MACC1Q6ZN28 852 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 DNAJB7Q7Z6W7 309 aaPredicted RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 IFNEQ86WN2 208 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 ZSWIM9Q86XI8 627 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 GALNT13Q8IUC8 556 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 APCDD1Q8J025 514 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 RBFAQ8N0V3 343 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 VWCEQ96DN2 955 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SCLYQ96I15 445 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CCDC115Q96NT0 180 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 HBEGFQ99075 208 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CGREF1Q99674 301 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 IPPKQ9H8X2 491 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 NTN4Q9HB63 628 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 CD320Q9NPF0 282 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 LATS2Q9NRM7 1088 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 ASIC5Q9NY37 505 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 SUN2Q9UH99 717 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 GNPTGQ9UJJ9 305 aa8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 POLR3HQ9Y535 204 aaPredicted RBP8.15□□□□□ -1.1
TRIM53BP-201ENST00000532912 RAD51BO15315 384 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 SOCS5O75159 536 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 CDH1P12830 882 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 GGT1P19440 569 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 CALRP27797 417 aaKnown RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 HNF1BP35680 557 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 HSPA7P48741 367 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 ADARB1P78563 741 aaKnown RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 CTBSQ01459 385 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 NOGQ13253 232 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 PWP1Q13610 501 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 RAB33AQ14088 237 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 MAP7Q14244 749 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 NR6A1Q15406 480 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 AP5B1Q2VPB7 878 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 PLA2G4EQ3MJ16 856 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 AASDHQ4L235 1098 aaPredicted RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 AP1ARQ63HQ0 302 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 PTRHD1Q6GMV3 140 aaKnown RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 METTL2BQ6P1Q9 378 aaKnown RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 TBPL2Q6SJ96 375 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 FRA10AC1Q70Z53 315 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 TRIM46Q7Z4K8 759 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 MSRB3Q8IXL7 192 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 PLPP6Q8IY26 295 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 CBARPQ8N350 705 aaPredicted RBP8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 OR8J3Q8NGG0 315 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 OR6K2Q8NGY2 324 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 RHBDF1Q96CC6 855 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 FBXL20Q96IG2 436 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 ZNF583Q96ND8 569 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 LYSMD1Q96S90 227 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 C17orf80Q9BSJ5 609 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 NTMT1Q9BV86 223 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 HERC2P3Q9BVR0 1158 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 TM6SF2Q9BZW4 377 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 CLPBQ9H078 707 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 ZFYVE1Q9HBF4 777 aa8.15□□□□□ -1.11
TRIM53BP-201ENST00000532912 RDH14Q9HBH5 336 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms