RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 CFAP77Q6ZQR2 320 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 SEPT14Q6ZU15 432 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 IKBIPQ70UQ0 350 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 TUBA1AQ71U36 451 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 RSRC2Q7L4I2 434 aaKnown RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 COPS6Q7L5N1 327 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 TMPRSS12Q86WS5 348 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 MUC20Q8N307 709 aaPredicted RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 FRMD1Q8N878 549 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 KBTBD3Q8NAB2 608 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 CSNK2A3Q8NEV1 391 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 BBS10Q8TAM1 723 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 SKA1Q96BD8 255 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 ARHGEF26Q96DR7 871 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 TMEM19Q96HH6 336 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 IGSF21Q96ID5 467 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 DUX5Q96PT3 197 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 MTERF1Q99551 399 aaKnown RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 GFI1Q99684 422 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 SEPT5Q99719 369 aaPredicted RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 TUBA1CQ9BQE3 449 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 CHCHD6Q9BRQ6 235 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 PIGMQ9H3S5 423 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 UBTD1Q9HAC8 227 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 SDF2L1Q9HCN8 221 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 PLSCR4Q9NRQ2 329 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 SETD4Q9NVD3 440 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 DONSONQ9NYP3 566 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 POLLQ9UGP5 575 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 KCNG2Q9UJ96 466 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 PADI1Q9ULC6 663 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 OR2W1Q9Y3N9 320 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 LAMA2P24043 3122 aaKnown RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 PHIPQ8WWQ0 1821 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 LAMB1P07942 1786 aa2.53□□□□□ -2
PTPN11-203ENST00000530818 RBBP6Q7Z6E9 1792 aaKnown RBP2.53□□□□□ -2
PTPN11-203ENST00000530818 COL6A3P12111 3177 aa2.53□□□□□ -2.01
PTPN11-203ENST00000530818 RTL9Q8NET4 1388 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 EYSQ5T1H1 3165 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 A0A1W2PR77 199 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 TTC36A6NLP5 189 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 A8MZ25 164 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PRR23D1E9PI22 279 aaPredicted RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 HCRTR2O43614 444 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PLPP2O43688 288 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 XPNPEP2O43895 674 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 BAIAP3O94812 1187 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PRR23D2P0DMB1 279 aaPredicted RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CDH1P12830 882 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KRT10P13645 584 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GABRB1P18505 474 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CHMP24386 653 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GARSP41250 739 aaKnown RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GALCP54803 685 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 HUNKP57058 714 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 RPL36AP83881 106 aaKnown RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PDE1BQ01064 536 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 SETQ01105 290 aaPredicted RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CDC16Q13042 620 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 TNFAIP1Q13829 316 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CCDC184Q52MB2 194 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KRTCAP3Q53RY4 240 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 RAB6CQ53S08 254 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 STXBP5Q5T5C0 1151 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GKAP1Q5VSY0 366 aaPredicted RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 FRG2Q64ET8 278 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KLHL35Q6PF15 583 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KCTD18Q6PI47 426 aaPredicted RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 C9orf139Q6ZV77 190 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 ASB18Q6ZVZ8 466 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GSTA5Q7RTV2 222 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CEP97Q8IW35 865 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 GPC2Q8N158 579 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 RASGEF1CQ8N431 466 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 RFLNBQ8N5W9 214 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PPHLN1Q8NEY8 458 aaKnown RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 SLC44A1Q8WWI5 657 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 SMARCE1Q969G3 411 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 TAAR8Q969N4 342 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 MTBPQ96DY7 904 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 C1orf74Q96LT6 269 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 CMTM3Q96MX0 182 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 NEUROD6Q96NK8 337 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 OR1F2PQ96R84 312 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PLEKHF1Q96S99 279 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 SRSF8Q9BRL6 282 aaKnown RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 RAB6CQ9H0N0 254 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 BLOC1S4Q9NUP1 217 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 PAG1Q9NWQ8 432 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 HCFC1R1Q9NWW0 138 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 EHD2Q9NZN4 543 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KLHL9Q9P2J3 617 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 OR14J1Q9UGF5 321 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 LOXL2Q9Y4K0 774 aa2.52□□□□□ -2.01
PTPN11-203ENST00000530818 KIAA0100Q14667 2235 aaKnown RBP2.52□□□□□ -2.01
PTPN11-203ENST00000530818 ARAP2Q8WZ64 1704 aa2.51□□□□□ -2.01
PTPN11-203ENST00000530818 SMCHD1A6NHR9 2005 aa2.51□□□□□ -2.01
PTPN11-203ENST00000530818 PTPRCP08575 1304 aa2.51□□□□□ -2.01
PTPN11-203ENST00000530818 ITIH6Q6UXX5 1313 aa2.51□□□□□ -2.01
PTPN11-203ENST00000530818 EME2A4GXA9 379 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms