RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RAB5BP61020 215 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 HSPB3Q12988 150 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 KIAA1161Q6NSJ0 714 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 OR4L1Q8NH43 312 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 IL1RAPQ9NPH3 570 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 USP20Q9Y2K6 914 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 HSPB11Q9Y547 144 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 C9JVG2 144 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ARPC2O15144 300 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 RTP1P59025 263 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ATP6V0D1P61421 351 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TIGD6Q17RP2 521 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 REP15Q6BDI9 236 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TMEM184CQ9NVA4 438 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TRBV23OR9-2A0A075B6M9 112 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 A0A1W2PPM1 405 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 MUSKO15146 869 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 LCN1P31025 176 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 SSX2Q16385 188 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 CEP68Q76N32 757 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 NUP54Q7Z3B4 507 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 CMC1Q7Z7K0 106 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 HEXDCQ8WVB3 486 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TMEM203Q969S6 136 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 HDAC10Q969S8 669 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 C7orf34Q96L11 122 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 MIPEPQ99797 713 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 LACTBL1A8MY62 500 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ACOX3O15254 700 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 IL12BP29460 328 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 RPL22P35268 128 aaKnown RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 KLF10Q13118 480 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 SPATA22Q8NHS9 363 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 C7orf50Q9BRJ6 194 aaKnown RBP13.52□□□□□ -0.25
LRRK1-202ENST00000525284 RNF19AQ9NV58 838 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 SLC17A7Q9P2U7 560 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 WDR37Q9Y2I8 494 aa13.52□□□□□ -0.25
LRRK1-202ENST00000525284 ITGA10O75578 1167 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 HOXB6P17509 224 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ATP5C1P36542 298 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 FAM13CQ8NE31 585 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 VCPIP1Q96JH7 1222 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 TULP2O00295 520 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CALCAP01258 141 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 COL6A2P12110 1019 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CD36P16671 472 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 MATKP42679 507 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 GNPDA1P46926 289 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 PEX6Q13608 980 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CLCA4Q14CN2 919 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 MINDY4Q4G0A6 757 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CENPMQ9NSP4 180 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ICAM1P05362 532 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 EDNRAP25101 427 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 DCKP27707 260 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 KLHL22Q53GT1 634 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 RBM48Q5RL73 367 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CAPN13Q6MZZ7 669 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF705FA8MVS1 300 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 HSBP1L1C9JCN9 74 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 LIASO43766 372 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 RPP14O95059 124 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 RENP00797 406 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 GLRA2P23416 452 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 PTPN6P29350 595 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 FXYD6P3P58550 94 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 GNA12Q03113 381 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ACMSDQ8TDX5 336 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CTPS2Q9NRF8 586 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 DNAAF2Q9NVR5 837 aaKnown RBP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 CLCA1A8K7I4 914 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 GADD45GO95257 159 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 PEPDP12955 493 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
LRRK1-202ENST00000525284 SLC30A10Q6XR72 485 aa13.51□□□□□ -0.25
LRRK1-202ENST00000525284 ALLCQ8N6M5 410 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms