RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GOLGA8TH3BQL2 631 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 MATN2O00339 956 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 NTN3O00634 580 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 HGSO14964 777 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PPM1DO15297 605 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 EIF3HO15372 352 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR1I1O60431 355 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 RASSF9O75901 435 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 EML2O95834 649 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PROS1P07225 676 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TYRP1P17643 537 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ITGB6P18564 788 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CHRM3P20309 590 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPS3P23396 243 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CD1CP29017 333 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FMO4P31512 558 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCKBRP32239 447 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CSTF2P33240 577 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CA5AP35218 305 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC19A1P41440 591 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ELK3P41970 407 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 MLLT3P42568 568 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PREPP48147 710 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CD151P48509 253 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARL4DP49703 201 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CSE1LP55060 971 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ADARP55265 1226 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLDN6P56747 220 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 GABREP78334 506 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 HSPA14Q0VDF9 509 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ILF2Q12905 390 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PRKAA1Q13131 559 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 GPR18Q14330 331 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLCA4Q14CN2 919 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 BRD3Q15059 726 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCTD19Q17RG1 926 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TYSND1Q2T9J0 566 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 HSP90AA5PQ58FG0 334 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 C3orf38Q5JPI3 329 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM164Q5U3C3 297 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT3A1Q6NUS8 523 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM71Q6P5X7 295 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FOXR1Q6PIV2 292 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 WDR74Q6RFH5 385 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM83HQ6ZRV2 1179 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIAA0408Q6ZU52 694 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 USP53Q70EK8 1073 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 RAB11FIP2Q7L804 512 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 LDB1Q86U70 411 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PDZD3Q86UT5 571 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC25Q86WR0 208 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 OOSP2Q86WS3 158 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF761Q86XN6 746 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 SFTPA2Q8IWL1 248 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PALM2Q8IXS6 379 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZBED8Q8IZ13 594 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 AGBL5Q8NDL9 886 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ACVR1CQ8NER5 493 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR4D9Q8NGE8 314 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 WDR36Q8NI36 951 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 PYROXD1Q8WU10 500 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 NAT14Q8WUY8 206 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 LCN9Q8WX39 176 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZCCHC14Q8WYQ9 949 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TFGQ92734 400 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CDKL2Q92772 493 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CERS2Q96G23 380 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZDHHC12Q96GR4 267 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ATXN7L3BQ96GX2 97 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 SIGLEC10Q96LC7 697 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC74BQ96LY2 380 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 RMDN2Q96LZ7 410 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 HGH1Q9BTY7 390 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CARD6Q9BX69 1037 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM129AQ9BZQ8 928 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FOXP3Q9BZS1 431 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TSPYL1Q9H0U9 437 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 TRIT1Q9H3H1 467 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIR3DX1Q9H7L2 352 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 MVB12BQ9H7P6 319 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 POLR1BQ9H9Y6 1135 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 RDH14Q9HBH5 336 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC40A1Q9NP59 571 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 THSD1Q9NS62 852 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 IARS2Q9NSE4 1012 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 NSMCE4AQ9NXX6 385 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZFATQ9P243 1243 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF624Q9P2J8 865 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 MTRF1LQ9UGC7 380 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 POLG2Q9UHN1 485 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 FBXO5Q9UKT4 447 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ATXN7L1Q9ULK2 861 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 WASF3Q9UPY6 502 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ASF1AQ9Y294 204 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 WDR37Q9Y2I8 494 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 CRYL1Q9Y2S2 319 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms