RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MTO1Q9Y2Z2 717 aaKnown RBP6.96□□□□□ -1.3
NEDD8-203ENST00000524927 MYO7BQ6PIF6 2116 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 A0A087WV62 115 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 A0A087WWV3 80 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 B4E171 279 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 RAB27BO00194 218 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 TOR1BO14657 336 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 YY2O15391 372 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 SLC31A1O15431 190 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 SPRY1O43609 319 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 TLR5O60602 858 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 GCATO75600 419 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 KRT19P08727 400 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 GCFC2P16383 781 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 HNRNPA2B1P22626 353 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 IL1R2P27930 398 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 DRD3P35462 400 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 TSPAN7P41732 249 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 HALP42357 657 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 PSMD8P48556 350 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 WNT3P56703 355 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 PPP2R2BQ00005 443 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 BOP1Q14137 746 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM132DQ14C87 1099 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 CLPPQ16740 277 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 PDCD4Q53EL6 469 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 PLA1AQ53H76 456 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 INO80DQ53TQ3 878 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 GCNT7Q6ZNI0 430 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 CHST9Q7L1S5 443 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 NUP93Q8N1F7 819 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 MUL1Q969V5 352 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 MED15Q96RN5 788 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 PPP1R9BQ96SB3 815 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 HEPHQ9BQS7 1158 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 HERPUD2Q9BSE4 406 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 SLC39A1Q9NY26 324 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 CNOT11Q9UKZ1 510 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 TCAF1Q9Y4C2 921 aa6.95□□□□□ -1.3
NEDD8-203ENST00000524927 MRPS18BQ9Y676 258 aaKnown RBP6.95□□□□□ -1.3
NEDD8-203ENST00000524927 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 SERINC4A6NH21 518 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 CCDC169A6NNP5 214 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 C19orf84I3L1E1 186 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 AREL1O15033 823 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 CEACAM4O75871 244 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 INMTO95050 263 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 LY6G6DO95868 133 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 HLA-FP30511 346 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 MAN1A1P33908 653 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 ATP5C1P36542 298 aaKnown RBP6.94□□□□□ -1.3
NEDD8-203ENST00000524927 C9orf64Q5T6V5 341 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 ZNF585AQ6P3V2 769 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 MTFR2Q6P444 385 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 XKRXQ6PP77 449 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 LVRNQ6Q4G3 990 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM135Q86UB9 458 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 ESX1Q8N693 406 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEDD8-203ENST00000524927 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 ACBD4Q8NC06 268 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 ZPBPQ9BS86 351 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 MAGEB5Q9BZ81 275 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 DPP3Q9NY33 737 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 SHOC2Q9UQ13 582 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 C2CD2Q9Y426 696 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM184BQ9Y519 407 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-203ENST00000524927 HS3ST3A1Q9Y663 406 aa6.94□□□□□ -1.3
NEDD8-203ENST00000524927 MORC2Q9Y6X9 1032 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-203ENST00000524927 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 FAM92AA1XBS5 289 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CCDC78A2IDD5 438 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 E2F3O00716 465 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 HNRNPDLO14979 420 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 BAG4O95429 457 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CPNE6O95741 557 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 PRLRP16471 622 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 AGAP20933 346 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 F8A1P23610 371 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ACVR2AP27037 513 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 NPTX2P47972 431 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ST8SIA6P61647 398 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 KRT83P78385 493 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 TRA2AQ13595 282 aaKnown RBP eCLIP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ARHGEF7Q14155 803 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 INSCQ1MX18 579 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CCDC38Q502W7 563 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 OR6B2Q6IFH4 312 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 NEK5Q6P3R8 708 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 KYAT3Q6YP21 454 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 SPRED1Q7Z699 444 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 PTAR1Q7Z6K3 402 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 PIM3Q86V86 326 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 KCNMB4Q86W47 210 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ZC3H3Q8IXZ2 948 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CPXM2Q8N436 756 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms