RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 DRD5P21918 477 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 JAK1P23458 1154 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 GATA3P23771 443 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSD17B2P37059 387 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CLCN5P51795 746 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CNN1P51911 297 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 AIF1P55008 147 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATP5IP56385 69 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 SUMO2P61956 95 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 MRPS34P82930 218 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 NAE1Q13564 534 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CNGA3Q16281 694 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 PFKFB3Q16875 520 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 TREML2Q5T2D2 321 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 GCNT6Q5T4J0 391 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 LRRC38Q5VT99 294 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 FBXO42Q6P3S6 717 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 PAPD4Q6PIY7 484 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ENPP7Q6UWV6 458 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 KIF6Q6ZMV9 814 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM26Q6ZUK4 368 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAVSQ7Z434 540 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 BNIPLQ7Z465 357 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 DTX2Q86UW9 622 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPR180Q86V85 440 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 TAX1BP1Q86VP1 789 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CIR1Q86X95 450 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 REXO1L1PQ8IX06 675 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CADM3Q8N126 398 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM217Q8N7C4 229 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 KIAA0895Q8NCT3 520 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 STEAP2Q8NFT2 490 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR56B1Q8NGI3 324 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 HUS1BQ8NHY5 278 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ABHD4Q8TB40 342 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPT2Q8TD30 523 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC16A10Q8TF71 515 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 OIT3Q8WWZ8 545 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 PIGKQ92643 395 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 LENG9Q96B70 501 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 EPSTI1Q96J88 318 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 RPGRIP1Q96KN7 1286 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 EGLN2Q96KS0 407 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF607Q96SK3 696 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 NEU1Q99519 415 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 FEVQ99581 238 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 JPH2Q9BR39 696 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF559Q9BR84 538 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 MXRA8Q9BRK3 442 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 IFT27Q9BW83 186 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 B3GNT4Q9C0J1 378 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 EGLN1Q9GZT9 426 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM192AQ9GZU8 254 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATG10Q9H0Y0 220 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 PNNQ9H307 717 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 UBQLN3Q9H347 655 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 C12orf65Q9H3J6 166 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 PIGMQ9H3S5 423 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 HIPK3Q9H422 1215 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 XKR8Q9H6D3 395 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 EVA1AQ9H8M9 152 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 KCNMB3Q9NPA1 279 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 TBC1D13Q9NVG8 400 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 HYPKQ9NX55 129 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 GRHL1Q9NZI5 618 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CNOT2Q9NZN8 540 aaKnown RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 RNF181Q9P0P0 153 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAPGEFL1Q9UHV5 662 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 MGAT4BQ9UQ53 548 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 STK38LQ9Y2H1 464 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CLIC4Q9Y696 253 aa3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 V9GYY5 206 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 CENPJQ9HC77 1338 aaPredicted RBP3.88□□□□□ -1.79
RNU4-60P-201ENST00000517239 AKNAQ7Z591 1439 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 C17orf102A2RUQ5 167 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM247A6NEH6 219 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANKDD1BA6NHY2 528 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM157AC9JC47 383 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 MEIS2O14770 477 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAPK13O15264 365 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CHADO15335 359 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 AP5Z1O43299 807 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 SUV39H1O43463 412 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMPRSS11DO60235 418 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 B4GALT2O60909 372 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 RHBDL1O75783 438 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 GDF11O95390 407 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ACSL3O95573 720 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 SERPINA3P01011 423 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 IGLV1-40P01703 118 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ICAM1P05362 532 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 YES1P07947 543 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 RFPL3SP0C7P2 107 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 RALAP11233 206 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PCNAP12004 261 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CCDC130P13994 396 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF18P17022 549 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 NMBRP28336 390 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms