RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZFP57	Q9NU63	452 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	ANO10	Q9NW15	660 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	TUBE1	Q9UJT0	475 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZNF711	Q9Y462	761 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PSAT1	Q9Y617	370 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	NOTCH3	Q9UM47	2321 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	COL11A1	P12107	1806 aa	Predicted RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	PLIN4	Q96Q06	1357 aa		4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479	MYH9	P35579	1960 aa	Known RBP	4.36	□□□□□ -1.71
RUFY3-215	ENST00000515479		A0A0G2JMZ2	1700 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	SI	P14410	1827 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	LCT	P09848	1927 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479		A0A1B0GVL5	298 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	C19orf81	C9J6K1	198 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZNF587B	E7ETH6	402 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	PER2	O15055	1255 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	ENTPD3	O75355	529 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	RFPL2	O75678	378 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	SRC	P12931	536 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC2A4	P14672	509 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	PTPN2	P17706	415 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	TDO2	P48775	406 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCZ1B	P86790	482 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCZ1	P86791	482 aa	Predicted RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	CEBPZ	Q03701	1054 aa	Known RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	ITGAD	Q13349	1161 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	TUBB8	Q3ZCM7	444 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	LCE1F	Q5T754	118 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	WDR78	Q5VTH9	848 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	CPLX2	Q6PUV4	134 aa	Known RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	MFSD6	Q6ZSS7	791 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	GPR142	Q7Z601	462 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	SPICE1	Q8N0Z3	855 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	ENAH	Q8N8S7	591 aa	Predicted RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	DUX3	Q96PT4	197 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	CLSTN3	Q9BQT9	956 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	NACAP1	Q9BZK3	213 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	TSPYL1	Q9H0U9	437 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	HSD3B7	Q9H2F3	369 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	RNF41	Q9H4P4	317 aa	Predicted RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	MROH8	Q9H579	483 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	YY1AP1	Q9H869	796 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	FBXO2	Q9UK22	296 aa	Predicted RBP	4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479	FEM1B	Q9UK73	627 aa		4.35	□□□□□ -1.71
RUFY3-215	ENST00000515479		A0A087WWV3	80 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	PABPN1L	A6NDY0	278 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCDC69	A6NI79	296 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC15A5	A6NIM6	579 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM72C	H0Y354	149 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	IFIT3	O14879	490 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	DCX	O43602	365 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	PLRG1	O43660	514 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	NEMF	O60524	1076 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	DEXI	O95424	95 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	TIMP1	P01033	207 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	ITGAX	P20702	1163 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	MARK3	P27448	753 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CHAT	P28329	748 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	GYG1	P46976	350 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	NT5C2	P49902	561 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	HMGCS2	P54868	508 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	NR1H2	P55055	460 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	KRTAP10-12	P60413	245 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	TLE2	Q04725	743 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	LRMP	Q12912	555 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SPP2	Q13103	211 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	NEDD9	Q14511	834 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	WTAP	Q15007	396 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	PPP2R5B	Q15173	497 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCDC6	Q16204	474 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM72A	Q5TYM5	149 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	IRAK1BP1	Q5VVH5	260 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM72D	Q6L9T8	149 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	C19orf48	Q6RUI8	117 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	B3GNT6	Q6ZMB0	384 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CCDC186	Q7Z3E2	898 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	MOGAT3	Q86VF5	341 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	FAM72B	Q86X60	149 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	DIS3L2	Q8IYB7	885 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CIART	Q8N365	385 aa	Predicted RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	MYCT1	Q8N699	235 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SPC24	Q8NBT2	197 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SDR42E1	Q8WUS8	393 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SECISBP2L	Q93073	1101 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	NSUN4	Q96CB9	384 aa	Known RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	KXD1	Q9BQD3	176 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	SLC26A6	Q9BXS9	759 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	RASSF1	Q9NS23	344 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	ABCF3	Q9NUQ8	709 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	ALKBH4	Q9NXW9	302 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	C1RL	Q9NZP8	487 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	CLIP2	Q9UDT6	1046 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	TAGLN3	Q9UI15	199 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	TCF19	Q9Y242	345 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	ZNF236	Q9UL36	1845 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	DOCK5	Q9H7D0	1870 aa		4.34	□□□□□ -1.71
RUFY3-215	ENST00000515479	PRRC2B	Q5JSZ5	2229 aa	Known RBP	4.34	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms