RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	POLG2	Q9UHN1	485 aa		7.33	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZMIZ1	Q9ULJ6	1067 aa		7.33	□□□□□ -1.24
NR1I3-231	ENST00000512340	PNMA8B	Q9ULN7	279 aa	Predicted RBP	7.33	□□□□□ -1.24
NR1I3-231	ENST00000512340	ASXL3	Q9C0F0	2248 aa		7.33	□□□□□ -1.24
NR1I3-231	ENST00000512340	RP1	P56715	2156 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TRBV23OR9-2	A0A075B6M9	112 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	UQCRHL	A0A096LP55	91 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TCRBV7S3A2	A0A539	114 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	LILRA5	A6NI73	299 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	MATN2	O00339	956 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	HYAL3	O43820	417 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	AVIL	O75366	819 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	SPAG6	O75602	509 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TMEM63A	O94886	807 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	DKK1	O94907	266 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	FUCA1	P04066	466 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	UQCRH	P07919	91 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	CHRM3	P20309	590 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	RPS3	P23396	243 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	RPL10	P27635	214 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	NMBR	P28336	390 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	RBMS1	P29558	406 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	MLLT3	P42568	568 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ARSD	P51689	593 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ADAR	P55265	1226 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	EIF3B	P55884	814 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	MAZ	P56270	477 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	C2orf54	Q08AI8	447 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	PDIA2	Q13087	525 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	C11orf91	Q3C1V1	193 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	AMZ1	Q400G9	498 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TMEM164	Q5U3C3	297 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ANKRD22	Q5VYY1	191 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ICE2	Q659A1	982 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZNF470	Q6ECI4	717 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	LRRC8E	Q6NSJ5	796 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TMEM26	Q6ZUK4	368 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZNF438	Q7Z4V0	828 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	SPRED1	Q7Z699	444 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TMEM135	Q86UB9	458 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	KCNMB4	Q86W47	210 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	C17orf82	Q86X59	251 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	PIANP	Q8IYJ0	282 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	NAGS	Q8N159	534 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	SLC37A2	Q8TED4	501 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	PYROXD1	Q8WU10	500 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	SKA2	Q8WVK7	121 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	MFSD3	Q96ES6	412 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZDHHC12	Q96GR4	267 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	C12orf66	Q96MD2	445 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	CMKLR1	Q99788	373 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TRIM51	Q9BSJ1	452 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	CARD6	Q9BX69	1037 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	PHACTR1	Q9C0D0	580 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	NRSN2	Q9GZP1	204 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	DPH5	Q9H2P9	285 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	MVB12B	Q9H7P6	319 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	PRDM8	Q9NQV8	689 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	IMP3	Q9NV31	184 aa	Known RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	FAM8A1	Q9UBU6	413 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	TMPRSS11E	Q9UL52	423 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	SNX24	Q9Y343	169 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	AK5	Q9Y6K8	562 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	RNF215	Q9Y6U7	377 aa		7.32	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZFC3H1	O60293	1989 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	LRP4	O75096	1905 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	PIKFYVE	Q9Y2I7	2098 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CCDC187	A0A096LP49	1063 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	FAM221B	A6H8Z2	402 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	OR51F1	A6NGY5	319 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	ZNF839	A8K0R7	811 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	HMGB1P1	B2RPK0	211 aa	Predicted RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340		D6RAR5	112 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	HGS	O14964	777 aa	Predicted RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	RAD51C	O43502	376 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CS	O75390	466 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	VPS26A	O75436	327 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	JMJD7	P0C870	316 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	MTHFD1	P11586	935 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CSTF2	P33240	577 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	PHB	P35232	272 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	SKIV2L2	P42285	1042 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	MAGEA3	P43357	314 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	RPL21	P46778	160 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	ARL4D	P49703	201 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	RGS4	P49798	205 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CTSC	P53634	463 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	PLTP	P55058	493 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	INHBC	P55103	352 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CCL7	P80098	99 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	INSM1	Q01101	510 aa	Predicted RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	DHX9	Q08211	1270 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	SQSTM1	Q13501	440 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	BOP1	Q14137	746 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	FRG1	Q14331	258 aa	Known RBP	7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	NFE2L1	Q14494	772 aa		7.31	□□□□□ -1.24
NR1I3-231	ENST00000512340	CRYM	Q14894	314 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms