RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 HMG20BQ9P0W2 317 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 DNAJB9Q9UBS3 223 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 INTS6Q9UL03 887 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 AGO1Q9UL18 857 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 PIN4Q9Y237 131 aaKnown RBP2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 CMAHPQ9Y471 501 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 MAU2Q9Y6X3 613 aa2.37□□□□□ -2.03
DEPDC1B-204ENST00000509006 A0A087WV48 116 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 GPR75-ASB3A0A0A6YYF3 556 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 A4D1N5 150 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 NPIPB13A6NJU9 1138 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC9B1P1A6NJY1 282 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 NPIPB5A8MRT5 1133 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 NPIPB4C9JG80 1138 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 RASGRF2O14827 1237 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SSX5O60225 188 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DIAPH2O60879 1101 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 REC8O95072 547 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MOCS3O95396 460 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 TRUB2O95900 331 aaKnown RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 PENKP01210 267 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 IL1AP01583 271 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCDC159P0C7I6 412 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC2A4P14672 509 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DAOP14920 347 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 PDGFRAP16234 1089 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 NAGAP17050 411 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MYF6P23409 242 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CASQ1P31415 396 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CTNNB1P35222 781 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 GLIPR1P48060 266 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 TDO2P48775 406 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC12A3P55017 1021 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 F2RL1P55085 397 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SH3BGRP55822 239 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC26A5P58743 744 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 KIAA1024LP59773 190 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ST8SIA6P61647 398 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CYP4A11Q02928 519 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MRPL28Q13084 256 aaKnown RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF273Q14593 569 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 IL11RAQ14626 422 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 OASLQ15646 514 aaKnown RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ASTE1Q2TB18 679 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 AP5B1Q2VPB7 878 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCDC40Q4G0X9 1142 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CBWD6Q4V339 395 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MDH1BQ5I0G3 518 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CBWD3Q5JTY5 395 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 C12orf60Q5U649 245 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMEM268Q5VZI3 342 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 NCAPH2Q6IBW4 605 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 C17orf99Q6UX52 265 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DENND5BQ6ZUT9 1274 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DET1Q7L5Y6 550 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 PRSS45Q7RTY3 260 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 GPAT4Q86UL3 456 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 EXOC3L1Q86VI1 746 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 PI4KAP1Q8N8J0 262 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZBTB44Q8NCP5 570 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF540Q8NDQ6 660 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CNNM3Q8NE01 707 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 LPCAT1Q8NF37 534 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 Q8NFD4 153 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DBF4BQ8NFT6 615 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CEP76Q8TAP6 659 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC35F5Q8WV83 523 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 LPGAT1Q92604 370 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 LRRC59Q96AG4 307 aaKnown RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ERLEC1Q96DZ1 483 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MMABQ96EY8 250 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF333Q96JL9 665 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 GAD1Q99259 594 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 PAFAH2Q99487 392 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SEPT5Q99719 369 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SH3GL2Q99962 352 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC25A33Q9BSK2 321 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 INPP5KQ9BT40 448 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 TCHPQ9BT92 498 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 HERC2P3Q9BVR0 1158 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 HEMGNQ9BXL5 484 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 RTN4RQ9BZR6 473 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 POLR1BQ9H9Y6 1135 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 RANGRFQ9HD47 186 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC22A11Q9NSA0 550 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC6A13Q9NSD5 602 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF624Q9P2J8 865 aaPredicted RBP2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 MKLN1Q9UL63 735 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 SNX7Q9UNH6 387 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF148Q9UQR1 794 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 RCE1Q9Y256 329 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 CARD8Q9Y2G2 431 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 WDR37Q9Y2I8 494 aa2.36□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM96BQ9Y3D0 163 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms