RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 STK17BO94768 372 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 NTRK1P04629 796 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 VCLP18206 1134 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 F8A1P23610 371 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 PSMA3P25788 255 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 PDHA2P29803 388 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 LONRF2Q1L5Z9 754 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 ZRANB3Q5FWF4 1079 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 PRSS42Q7Z5A4 293 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 AVL9Q8NBF6 648 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 KLHL6Q8WZ60 621 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 C12orf66Q96MD2 445 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 MAP3K3Q99759 626 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 FERMT1Q9BQL6 677 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 TMEM184BQ9Y519 407 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 MROH6A6NGR9 719 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 KCNJ13O60928 360 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 FOLR1P15328 257 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 ITGALP20701 1170 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 ACRV1P26436 265 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 FOXN2P32314 431 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 HALP42357 657 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 RAB15P59190 212 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 FOXM1Q08050 763 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 SEMA3AQ14563 771 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 TBR1Q16650 682 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 P3H1Q32P28 736 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 COLEC12Q5KU26 742 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 ATP1A1-AS1Q5TC04 95 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 CACHD1Q5VU97 1274 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 NAPRTQ6XQN6 538 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 CFAP206Q8IYR0 622 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 OR13J1Q8NGT2 312 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 OR6C1Q96RD1 312 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 TLR10Q9BXR5 811 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 TRIM4Q9C037 500 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 FAM117AQ9C073 453 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 OR52A5Q9H2C5 316 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 COG4Q9H9E3 785 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 AKIRIN1Q9H9L7 192 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 ZDHHC3Q9NYG2 299 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 SEMA5BQ9P283 1151 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 EPHA6Q9UF33 1036 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 SLC24A2Q9UI40 661 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 PCDHB11Q9Y5F2 797 aa16.33■□□□□ 0.2
PDLIM7-215ENST00000506161 CCDC162PA2VCL2 907 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 RASSF9O75901 435 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 IFNB1P01574 187 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 PTMAP06454 111 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 FAM87AP0C7U9 286 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 ATP1B2P14415 290 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 ITGB6P18564 788 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 PREPP48147 710 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 NFKB2Q00653 900 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 CEACAM20Q6UY09 585 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 IL22RA1Q8N6P7 574 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 HM13Q8TCT9 377 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 ULK4Q96C45 1275 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 ZNF514Q96K75 400 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 COPS8Q99627 209 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 ASPSCR1Q9BZE9 553 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 RAB33BQ9H082 229 aa16.32■□□□□ 0.2
PDLIM7-215ENST00000506161 PTPN13Q12923 2485 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 CCDC88CQ9P219 2028 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 OR5K3A6NET4 321 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 POLR1CO15160 346 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 NKX2-8O15522 239 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 KRT86O43790 486 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 NELFEP18615 380 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 RPL22P35268 128 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 HADHAP40939 763 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 KPNA2P52292 529 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 NFATC3Q12968 1075 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 ZNF534Q76KX8 674 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 TAS2R42Q7RTR8 314 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 LRRC8AQ8IWT6 810 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 RBM12BQ8IXT5 1001 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 NLGN4XQ8N0W4 816 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 PHC3Q8NDX5 983 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 NLGN4YQ8NFZ3 816 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 STYXQ8WUJ0 223 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 SLC41A2Q96JW4 573 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 TEFMQ96QE5 360 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 C19orf43Q9BQ61 176 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 FEZ2Q9UHY8 353 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 PCSK5Q92824 1860 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 PIEZO2Q9H5I5 2752 aa16.31■□□□□ 0.2
PDLIM7-215ENST00000506161 OR6C74A6NCV1 312 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 OR1I1O60431 355 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 SUN1O94901 812 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms