RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 KCTD11Q693B1 232 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 FBXO38Q6PIJ6 1188 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 IL22RA1Q8N6P7 574 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 ZNF398Q8TD17 642 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 SPATA13Q96N96 652 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 SRPK1Q96SB4 655 aaKnown RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 RUFY1Q96T51 708 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 ASPSCR1Q9BZE9 553 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 HACD3Q9P035 362 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 MTORP42345 2549 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 STX7O15400 261 aaKnown RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 CLDN1O95832 211 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 FURINP09958 794 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 PRKAR1AP10644 381 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 TPH1P17752 444 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 LPOP22079 712 aaPredicted RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 OAS2P29728 719 aaKnown RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 ARCN1P48444 511 aaKnown RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 RWDD2BP57060 319 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 LDLRAP1Q5SW96 308 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 C1QL3Q5VWW1 255 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 METRNLQ641Q3 311 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 PRSS42Q7Z5A4 293 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 AMZ2Q86W34 360 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 CDKL3Q8IVW4 592 aaPredicted RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 TRIM48Q8IWZ4 208 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 KLHL6Q8WZ60 621 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 CXorf40BQ96DE9 158 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 DNAJC1Q96KC8 554 aaKnown RBP12.84□□□□□ -0.35
DDX41-204ENST00000504807 RMDN2Q96LZ7 410 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 OR6C1Q96RD1 312 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX41-204ENST00000504807 PKP3Q9Y446 797 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
DDX41-204ENST00000504807 POLR1CO15160 346 aaPredicted RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 ANXA9O76027 345 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 MTHFD1P11586 935 aaKnown RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 FOLR1P15328 257 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 AMD1P17707 334 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 NR1D1P20393 614 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 STAT5AP42229 794 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 ATP1A2P50993 1020 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 FOXM1Q08050 763 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 GTF2H3Q13889 308 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 IRGCQ6NXR0 463 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 CEACAM20Q6UY09 585 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 TMEM135Q86UB9 458 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 NLGN4XQ8N0W4 816 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 FAM71DQ8N9W8 422 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 CCDC112Q8NEF3 446 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 NLGN4YQ8NFZ3 816 aaPredicted RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 SLC35B2Q8TB61 432 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 BRSK1Q8TDC3 778 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 ATG4AQ8WYN0 398 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 MAP3K3Q99759 626 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 TBL1YQ9BQ87 522 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 EPB41L1Q9H4G0 881 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 ASB8Q9H765 288 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 ARNT2Q9HBZ2 717 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 IMP3Q9NV31 184 aaKnown RBP12.83□□□□□ -0.36
DDX41-204ENST00000504807 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDX41-204ENST00000504807 SEMA5BQ9P283 1151 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 PDZD2O15018 2839 aa12.83□□□□□ -0.36
DDX41-204ENST00000504807 DNHD1Q96M86 4753 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 CCDC78A2IDD5 438 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 OR51F1A6NGY5 319 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 RASSF9O75901 435 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 EBLN1P0CF75 366 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 AKT1P31749 480 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 KRTAP21-3Q3LHN1 58 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 BCL7AQ4VC05 210 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 CACHD1Q5VU97 1274 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 EFCAB3Q8N7B9 438 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 TEX19Q8NA77 164 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 SPC24Q8NBT2 197 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 GALNT6Q8NCL4 622 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 OR2L2Q8NH16 312 aa12.82□□□□□ -0.36
DDX41-204ENST00000504807 SLC45A3Q96JT2 553 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms