RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 NPY2RP49146 381 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATN1P54259 1190 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 OR2B6P58173 313 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 OGDHQ02218 1023 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 BTN1A1Q13410 526 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MAMLD1Q13495 774 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 DGCR6Q14129 220 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 EFR3AQ14156 821 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MORF4L2Q15014 288 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 DDR2Q16832 855 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 HADHQ16836 314 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 NPNTQ6UXI9 565 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 PLEKHM3Q6ZWE6 761 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 RPS27LQ71UM5 84 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 GPR155Q7Z3F1 870 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 NRARPQ7Z6K4 114 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SPPL2CQ8IUH8 684 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 PHC2Q8IXK0 858 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 DDIASQ8IXT1 998 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 HS3ST5Q8IZT8 346 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 OR9I1Q8NGQ6 314 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 LHFPL5Q8TAF8 219 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATXN7L3BQ96GX2 97 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ASB2Q96Q27 587 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 KCTD14Q9BQ13 255 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 B3GNT5Q9BYG0 378 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ELOVL4Q9GZR5 314 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 DSN1Q9H410 356 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SERHL2Q9H4I8 314 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLAMF7Q9NQ25 335 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MORF4L1Q9UBU8 362 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SIX4Q9UIU6 781 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TSPAN16Q9UKR8 245 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MKL2Q9ULH7 1088 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF646O15015 1829 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ADGRA2Q96PE1 1338 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TRAV20A0A0B4J274 112 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MEIS3P2A8K0S8 358 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CENPXA8MT69 81 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ALG1L2C9J202 215 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 PTGES3LE9PB15 166 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 PDPK1O15530 556 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 PROSCO94903 275 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TBX18O95935 607 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MT-CO1P00395 513 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 UNGP13051 313 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 AKR1A1P14550 325 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ITGALP20701 1170 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SDHBP21912 280 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATP5OP48047 213 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 AP2S1P53680 142 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 FCGRTP55899 365 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 OCA2Q04671 838 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TARDBPQ13148 414 aaKnown RBP eCLIP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SP140Q13342 867 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TBCCQ15814 346 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAB6CQ53S08 254 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZMAT1Q5H9K5 638 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 BSPRYQ5W0U4 402 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 LAMTOR1Q6IAA8 161 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 MRM1Q6IN84 353 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLC27A1Q6PCB7 646 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SYCE2Q6PIF2 218 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 EPGNQ6UW88 154 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 AGMOQ6ZNB7 445 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 RBM23Q86U06 439 aaKnown RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACVR1CQ8NER5 493 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CPXM1Q96SM3 734 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAB6CQ9H0N0 254 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 DPEP3Q9H4B8 488 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CDCP1Q9H5V8 836 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZBTB20Q9HC78 741 aaPredicted RBP5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 XPNPEP3Q9NQH7 507 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 SIRT5Q9NXA8 310 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 UBP1Q9NZI7 540 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 CDY2AQ9Y6F7 541 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 STYXL1Q9Y6J8 313 aa5.71□□□□□ -1.5
SOX2-OT-218ENST00000498731 TTC28Q96AY4 2481 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 NRCAMQ92823 1304 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 IGKV6-21A0A0C4DH24 114 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PIPSLA2A3N6 862 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PDZK1P1A8MUH7 402 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CLDN5O00501 218 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 XPNPEP2O43895 674 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 BRINP1O60477 761 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PIGRP01833 764 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CHRM3P20309 590 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 GSTM2P28161 218 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CD6P30203 668 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATP6V1E1P36543 226 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 HLCSP50747 726 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CDH6P55285 790 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 BCAR1P56945 870 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RHDQ02161 417 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DSC1Q08554 894 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TUBA3CQ13748 450 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms