RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 MTERF4Q7Z6M4 381 aaKnown RBP3.93□□□□□ -1.78
TRIM4-205ENST00000496896 PCYOX1LQ8NBM8 494 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 TRIM58Q8NG06 486 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 TAS1R2Q8TE23 839 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 TRPC4APQ8TEL6 797 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 TRIM44Q96DX7 344 aaPredicted RBP3.93□□□□□ -1.78
TRIM4-205ENST00000496896 STAMBPL1Q96FJ0 436 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 PPM1MQ96MI6 270 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 SMC4Q9NTJ3 1288 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 C2orf42Q9NWW7 574 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 LIMA1Q9UHB6 759 aaKnown RBP3.93□□□□□ -1.78
TRIM4-205ENST00000496896 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 LDLRP01130 860 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 ICAM1P05362 532 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 HSP90AB1P08238 724 aaKnown RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PBX3P40426 434 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 NUCB2P80303 420 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 TECRLQ5HYJ1 363 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 ARHGAP11AQ6P4F7 1023 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 CASC1Q6TDU7 716 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 CYP20A1Q6UW02 462 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PIWIL4Q7Z3Z4 852 aaKnown RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 ADSSL1Q8N142 457 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 AFAP1Q8N556 730 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 EMC1Q8N766 993 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 STPG4Q8N801 248 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 HM13Q8TCT9 377 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PPP4R1Q8TF05 950 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 TMEM190Q8WZ59 177 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 EGLN2Q96KS0 407 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 ZNF354BQ96LW1 612 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 C7orf26Q96N11 449 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PLEKHF1Q96S99 279 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 UNC45AQ9H3U1 944 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 GRPEL1Q9HAV7 217 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 ZBTB20Q9HC78 741 aaPredicted RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 EPB41L5Q9HCM4 733 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 C9orf78Q9NZ63 289 aaPredicted RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 KCNE2Q9Y6J6 123 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 CPSF1Q10570 1443 aaKnown RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 FAM135BQ49AJ0 1406 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 PTPRMP28827 1452 aa3.92□□□□□ -1.78
TRIM4-205ENST00000496896 CDK12Q9NYV4 1490 aaPredicted RBP3.92□□□□□ -1.78
TRIM4-205ENST00000496896 A0A1W2PP64 1363 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 WISP2O76076 250 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 DDX58O95786 925 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 HSP90AA1P07900 732 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 HSPA1AP0DMV8 641 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 HSPA1BP0DMV9 641 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ERVK-10P10266 1014 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 NR2F2P24468 414 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ACADLP28330 430 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 HOXC8P31273 242 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 RGS2P41220 211 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 CEBPZQ03701 1054 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 NAB2Q15742 525 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 KLHL40Q2TBA0 621 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PCGF3Q3KNV8 242 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 NCEH1Q6PIU2 408 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PLXDC2Q6UX71 529 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PACS1Q6VY07 963 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 CD109Q6YHK3 1445 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 GLDNQ6ZMI3 551 aaPredicted RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 SDCCAG8Q86SQ7 713 aaPredicted RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 APLFQ8IW19 511 aaPredicted RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ITPRIPQ8IWB1 547 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 SLC5A8Q8N695 610 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 FRMD1Q8N878 549 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 RBM15BQ8NDT2 890 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ARHGEF2Q92974 986 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PERPQ96FX8 193 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 NEUROD6Q96NK8 337 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ASCL2Q99929 193 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 API5Q9BZZ5 524 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PIGMQ9H3S5 423 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 TRMT1Q9NXH9 659 aaKnown RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 EHD2Q9NZN4 543 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 KLHL9Q9P2J3 617 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 TMEM131LA2VDJ0 1609 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 ABCC4O15439 1325 aa3.91□□□□□ -1.78
TRIM4-205ENST00000496896 SOS1Q07889 1333 aaPredicted RBP3.91□□□□□ -1.78
TRIM4-205ENST00000496896 PREX1Q8TCU6 1659 aa3.9□□□□□ -1.78
TRIM4-205ENST00000496896 LRRC7Q96NW7 1537 aa3.9□□□□□ -1.78
TRIM4-205ENST00000496896 DIP2CQ9Y2E4 1556 aa3.9□□□□□ -1.78
TRIM4-205ENST00000496896 EDC4Q6P2E9 1401 aaKnown RBP3.9□□□□□ -1.78
TRIM4-205ENST00000496896 YTHDC2Q9H6S0 1430 aaKnown RBP3.9□□□□□ -1.78
TRIM4-205ENST00000496896 TMEM178BH3BS89 294 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 RTN3O95197 1032 aaPredicted RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 CAVIN2O95810 425 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 AGR2O95994 175 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 HIST1H2ABP04908 130 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 EIF2S1P05198 315 aaKnown RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ACTN1P12814 892 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ATP1A3P13637 1013 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 HIST1H2ADP20671 130 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms