RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 AQP12BA6NM10 295 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 KATNA1O75449 491 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 CSPG5O95196 566 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 POP4O95707 220 aaKnown RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 UGT2B4P06133 528 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 C1SP09871 688 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 MSH3P20585 1137 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 GRIA3P42263 894 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 GJA8P48165 433 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 CHN2P52757 468 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 EPHA5P54756 1037 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TLR1Q15399 786 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 NR6A1Q15406 480 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TEAD2Q15562 447 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TIGD2Q4W5G0 525 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 LCN8Q6JVE9 175 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 METTL2BQ6P1Q9 378 aaKnown RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 UGT2A3Q6UWM9 527 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 DPY19L3Q6ZPD9 716 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 MILR1Q7Z6M3 343 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ZFAND4Q86XD8 727 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 AQP12AQ8IXF9 295 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ADGRG2Q8IZP9 1017 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF557Q8N988 423 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 LRTOMTQ8WZ04 291 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TMEM125Q96AQ2 219 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 EME1Q96AY2 570 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ULK4Q96C45 1275 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 RHBDF1Q96CC6 855 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TCEAL4Q96EI5 215 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 COPS8Q99627 209 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 BBS2Q9BXC9 721 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 CD244Q9BZW8 370 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 MUC13Q9H3R2 512 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 KLHL42Q9P2K6 505 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ZFC3H1O60293 1989 aaKnown RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 DYTNA2CJ06 578 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ERVFC1P60507 584 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 PTSQ03393 145 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 EMX2Q04743 252 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 PRKG2Q13237 762 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 INPP5AQ14642 412 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ATP13A5Q4VNC0 1218 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 PAGE3Q5JUK9 113 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 RNF220Q5VTB9 566 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 PLPP4Q5VZY2 271 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 RNF165Q6ZSG1 346 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 Q6ZVU0 165 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 PROKR1Q8TCW9 393 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 TRAPPC9Q96Q05 1148 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 SEMA6AQ9H2E6 1030 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 ACTR3BQ9P1U1 418 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 SNX13Q9Y5W8 968 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
GARNL3-220ENST00000496711 NUP210Q8TEM1 1887 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-220ENST00000496711 IGLV3-16A0A075B6K0 115 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 H0YJX3 145 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 K7EPI3 171 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 EIF3FO00303 357 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-220ENST00000496711 AP1G1O43747 822 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 KIF1CO43896 1103 aaKnown RBP12.81□□□□□ -0.36
GARNL3-220ENST00000496711 IL12AP29459 219 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 B4GALNT1Q00973 533 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 DMC1Q14565 340 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 ABRAXAS2Q15018 415 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 GALNT4Q8N4A0 578 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 GOLM1Q8NBJ4 401 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 PHC3Q8NDX5 983 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 IRF7Q92985 503 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 PPP3R2Q96LZ3 170 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 GBP5Q96PP8 586 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 HBEGFQ99075 208 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 FAM192AQ9GZU8 254 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 ALG2Q9H553 416 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 B4GALT6Q9UBX8 382 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 TRPS1Q9UHF7 1281 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 INSL6Q9Y581 213 aa12.81□□□□□ -0.36
GARNL3-220ENST00000496711 ARPC2O15144 300 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 MOSPD3O75425 235 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 WDR47O94967 919 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 NPPAP01160 153 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 OR56A5P0C7T3 313 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 TYRP14679 529 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PTPN2P17706 415 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CASP2P42575 452 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PIK3CGP48736 1102 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SPINT3P49223 89 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 GSK3BP49841 420 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms