RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 S100PP25815 95 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NOMO3P69849 1222 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NCF4Q15080 339 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NOMO1Q15155 1222 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GPR19Q15760 415 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 TATDN3Q17R31 274 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 VPS26BQ4G0F5 336 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 XKR9Q5GH70 373 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 TMEM81Q6P7N7 255 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SSX9Q7RTT3 188 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 DEFB132Q7Z7B7 95 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CBWD2Q8IUF1 395 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZFPM1Q8IX07 1006 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC34A3Q8N130 599 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 EFHBQ8N7U6 833 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ASB2Q96Q27 587 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SPNS1Q9H2V7 528 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF334Q9HCZ1 680 aaPredicted RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PDGFCQ9NRA1 345 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 LATS2Q9NRM7 1088 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 STAP1Q9ULZ2 295 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 USP18Q9UMW8 372 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SSR3Q9UNL2 185 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PLSCR1O15162 318 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PI15O43692 258 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 MRPS14O60783 128 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ATG13O75143 517 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 AKAP5P24588 427 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PSMA1P25786 263 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CD6P30203 668 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SDC2P34741 201 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SHMT2P34897 504 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 UGT2B10P36537 528 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SOX9P48436 509 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NR2C2P49116 596 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 UBXN2AP68543 259 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 FOXM1Q08050 763 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CUL2Q13617 745 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 FSCN1Q16658 493 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PID1Q7Z2X4 250 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GALNT5Q7Z7M9 940 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 FBXO11Q86XK2 927 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 MIB1Q86YT6 1006 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ADGRG5Q8IZF4 528 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 OR5K1Q8NHB7 308 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 INTS12Q96CB8 462 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC47A1Q96FL8 570 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 BTN2A3PQ96KV6 586 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SSX3Q99909 188 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 OPTCQ9UBM4 332 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PGAP2Q9UHJ9 254 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 DPP7Q9UHL4 492 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 LINC00862A6NCI5 91 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 OR5K4A6NMS3 321 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF879B4DU55 563 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GPR25O00155 361 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ATP6AP2O75787 350 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 RETP07949 1114 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 UNGP13051 313 aaPredicted RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 HSD17B1P14061 328 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CPN2P22792 545 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CRKP46108 304 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GSK3BP49841 420 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 AIF1P55008 147 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 RAB5BP61020 215 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ADARB1P78563 741 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ABRQ12979 859 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 XRRA1Q6P2D8 792 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 MAVSQ7Z434 540 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CNIH3Q8TBE1 160 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 TSPAN17Q96FV3 270 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CRELD1Q96HD1 420 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 EXOC2Q96KP1 924 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 LURAP1Q96LR2 239 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 PIGUQ9H490 435 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 NIT2Q9NQR4 276 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 EVA1BQ9NVM1 165 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF358Q9NW07 568 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 XPR1Q9UBH6 696 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CPNE7Q9UBL6 633 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 ZDHHC2Q9UIJ5 367 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 JAG2Q9Y219 1238 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 SNAPC5O75971 98 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 HNRNPLP14866 589 aaKnown RBP eCLIP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 GABRB3P28472 473 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 POLR2IP36954 125 aaKnown RBP8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 CDK8P49336 464 aa8.08□□□□□ -1.12
CRNKL1-205ENST00000496549 APLP1P51693 650 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms