RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PKP1Q13835 747 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 LARS2Q15031 903 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 ARHGEF6Q15052 776 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 TRADDQ15628 312 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 TAF1BQ53T94 588 aaPredicted RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 PCID2Q5JVF3 399 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 KIAA1755Q5JYT7 1200 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 TMEM65Q6PI78 240 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 PAPD4Q6PIY7 484 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 FIGLAQ6QHK4 219 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 NAPRTQ6XQN6 538 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 MTSS1LQ765P7 747 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 PIGWQ7Z7B1 504 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 PEG10Q86TG7 708 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 UNC5CLQ8IV45 518 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 ZDHHC23Q8IYP9 409 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 NCOA7Q8NI08 942 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 EXOC6Q8TAG9 804 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 C9orf43Q8TAL5 461 aaPredicted RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 SNAPC3Q92966 411 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 MS4A10Q96PG2 267 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 KCNK16Q96T55 309 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 ERP44Q9BS26 406 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 GTPBP2Q9BX10 602 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 NT5C3AQ9H0P0 336 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 KLK15Q9H2R5 256 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 SRD5A3Q9H8P0 318 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 PAPOLBQ9NRJ5 636 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 SERTAD4Q9NUC0 356 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 TMOD2Q9NZR1 351 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 HMG20BQ9P0W2 317 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 TRMT6Q9UJA5 497 aaKnown RBP3.52□□□□□ -1.85
HFM1-208ENST00000488023 ERVK-11Q9UQG0 969 aa3.52□□□□□ -1.85
HFM1-208ENST00000488023 CLRN2A0PK11 232 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 MAGEA13PA6NCF6 341 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 TMEM202A6NGA9 273 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 GPR89AB7ZAQ6 455 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 UBXN8O00124 270 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 RASGRF2O14827 1237 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 CTDSPLO15194 276 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 PRAMEF11O60813 436 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 RGS11O94810 467 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 TMCC1O94876 653 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 GPR89BP0CG08 455 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 TFPIP10646 304 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 NR2F2P24468 414 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 FRKP42685 505 aaPredicted RBP3.51□□□□□ -1.85
HFM1-208ENST00000488023 PSMC4P43686 418 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 SULT1E1P49888 294 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 SMSP52788 366 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 MTA1Q13330 715 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 GAMTQ14353 236 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 FUT11Q495W5 492 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 CCDC183Q5T5S1 534 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 DCAF12L2Q5VW00 463 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 OR6B2Q6IFH4 312 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 ANKRD54Q6NXT1 300 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 CASC4Q6P4E1 433 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 FAM198BQ6UWH4 519 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 PLEKHM3Q6ZWE6 761 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 WDR53Q7Z5U6 358 aaPredicted RBP3.51□□□□□ -1.85
HFM1-208ENST00000488023 CCDC190Q86UF4 302 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 ZNF410Q86VK4 478 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 KDM8Q8N371 416 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 ARL14EPQ8N8R7 260 aaPredicted RBP3.51□□□□□ -1.85
HFM1-208ENST00000488023 TERB1Q8NA31 727 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 BEST2Q8NFU1 509 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 RIT1Q92963 219 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 RNF183Q96D59 192 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 SPDL1Q96EA4 605 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 ALG14Q96F25 216 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 DTD2Q96FN9 168 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 PANX3Q96QZ0 392 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 SEMA3CQ99985 751 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 CCSER1Q9C0I3 900 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 S1PR5Q9H228 398 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 MVB12BQ9H7P6 319 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 ACTR5Q9H9F9 607 aaPredicted RBP3.51□□□□□ -1.85
HFM1-208ENST00000488023 RNPEPL1Q9HAU8 725 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 RAB9BQ9NP90 201 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 KLHL1Q9NR64 748 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.51□□□□□ -1.853e-19■■■■□ 21.7
HFM1-208ENST00000488023 ARPP21Q9UBL0 812 aaPredicted RBP3.51□□□□□ -1.85
HFM1-208ENST00000488023 SLC9A2Q9UBY0 812 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 MTUS1Q9ULD2 1270 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 SLC8A2Q9UPR5 921 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 KDRP35968 1356 aa3.51□□□□□ -1.85
HFM1-208ENST00000488023 TMEM8BA6NDV4 472 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 SDR42E2A6NKP2 422 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 H0YCG3 227 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 AP3B1O00203 1094 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 PTGESO14684 152 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 AP5Z1O43299 807 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 KLHL41O60662 606 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 CRCPO75575 148 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 PALMO75781 387 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 NEURL1O76050 574 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 PRAMEF12O95522 483 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 CXCL14O95715 111 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms