RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 GTF3C4Q9UKN8 822 aa4.93□□□□□ -1.62
SRRM1-213ENST00000485441 KCNS2Q9ULS6 477 aa4.93□□□□□ -1.62
SRRM1-213ENST00000485441 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 INO80B-WBP1J3KQ70 363 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 LDLRP01130 860 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 FAM106CPP0CH98 169 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 FCGR1AP12314 374 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ITGA2P17301 1181 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 CYP11B2P19099 503 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 PCGF2P35227 344 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 MATR3P43243 847 aaKnown RBP eCLIP4.92□□□□□ -1.62
SRRM1-213ENST00000485441 NPY4RP50391 375 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ACSM1Q08AH1 577 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 KIF5AQ12840 1032 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 HSPB3Q12988 150 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 TNIP1Q15025 636 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 GCNT6Q5T4J0 391 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 PLA2G4FQ68DD2 849 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ZNF704Q6ZNC4 412 aaPredicted RBP4.92□□□□□ -1.62
SRRM1-213ENST00000485441 DNAJB7Q7Z6W7 309 aaPredicted RBP4.92□□□□□ -1.62
SRRM1-213ENST00000485441 OR8H3Q8N146 312 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ELP5Q8TE02 316 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 PHF21AQ96BD5 680 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ZNF385AQ96PM9 386 aaKnown RBP4.92□□□□□ -1.62
SRRM1-213ENST00000485441 CSTL1Q9H114 145 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 KLHL1Q9NR64 748 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 OSER1Q9NX31 292 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
SRRM1-213ENST00000485441 RNF7Q9UBF6 113 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 CGNL1Q0VF96 1302 aa4.92□□□□□ -1.62
SRRM1-213ENST00000485441 ANKRD66B4E2M5 251 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 TMEM178BH3BS89 294 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 SLC7A4O43246 635 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 ZNHIT1O43257 154 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 WDR1O75083 606 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 SIX3O95343 332 aaPredicted RBP4.91□□□□□ -1.62
SRRM1-213ENST00000485441 OR2T7P0C7T2 308 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 HOXC13P31276 330 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 COPB2P35606 906 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 PEX5P50542 639 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 RELQ04864 619 aaPredicted RBP4.91□□□□□ -1.62
SRRM1-213ENST00000485441 LTBQ06643 244 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 GTF2H2Q13888 395 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 HLFQ16534 295 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 TMEM35AQ53FP2 167 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 LRCH2Q5VUJ6 765 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 GTF2H2CQ6P1K8 395 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 PLXDC2Q6UX71 529 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 METTL23Q86XA0 190 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 FBXL14Q8N1E6 418 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 GBGT1Q8N5D6 347 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 DEPDC1BQ8WUY9 529 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 TMEM255BQ8WV15 326 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 ATL1Q8WXF7 558 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 SLAMF9Q96A28 289 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 SPDL1Q96EA4 605 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 CDCA5Q96FF9 252 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 FEVQ99581 238 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 BTBD10Q9BSF8 475 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 ZWILCHQ9H900 591 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 UBTD1Q9HAC8 227 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 DLGAP4Q9Y2H0 992 aa4.91□□□□□ -1.62
SRRM1-213ENST00000485441 A0A0G2JPF8 293 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 MYMKA6NI61 221 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 HNRNPCL3B7ZW38 293 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 EIF3DO15371 548 aaKnown RBP eCLIP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 BUD23O43709 281 aaKnown RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 GPR137BO60478 399 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 TSPAN1O60635 241 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 PPP1R3DO95685 299 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 ACAA1P09110 424 aaPredicted RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 HNRNPCL4P0DMR1 293 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 FDPSP14324 419 aaKnown RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 CDC25AP30304 524 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 KCNJ4P48050 445 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 POLR2LP62875 67 aaKnown RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 PRKAA1Q13131 559 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 C6orf136Q5SQH8 315 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 MPP7Q5T2T1 576 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 LINGO4Q6UY18 593 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 ADHFE1Q8IWW8 467 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 ZNF441Q8N8Z8 693 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 LILRB1Q8NHL6 650 aaPredicted RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 LNX1Q8TBB1 728 aaPredicted RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 SMG7Q92540 1137 aaKnown RBP4.9□□□□□ -1.63
SRRM1-213ENST00000485441 FIG4Q92562 907 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 FAM162AQ96A26 154 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 MUS81Q96NY9 551 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 SLX1AQ9BQ83 275 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 SEZ6LQ9BYH1 1024 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 TBC1D17Q9HA65 648 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 MYNNQ9NPC7 610 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 SLC24A2Q9UI40 661 aa4.9□□□□□ -1.63
SRRM1-213ENST00000485441 A0A087WV48 116 aa4.89□□□□□ -1.63
SRRM1-213ENST00000485441 MAGEA13PA6NCF6 341 aa4.89□□□□□ -1.63
SRRM1-213ENST00000485441 ANXA2P2A6NMY6 339 aa4.89□□□□□ -1.63
SRRM1-213ENST00000485441 H0Y626 953 aa4.89□□□□□ -1.63
SRRM1-213ENST00000485441 CLIC2O15247 247 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms