RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LCP2Q13094 533 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 PLD1Q13393 1074 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 FAM45BPQ6NSW5 357 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 ZCCHC8Q6NZY4 707 aaKnown RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 C11orf96Q7Z7L8 435 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 KIAA2013Q8IYS2 634 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 FAM45AQ8TCE6 357 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 SPPL2AQ8TCT8 520 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 AUTS2Q8WXX7 1259 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 SNX19Q92543 992 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 TMEM88BA6NKF7 163 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 KPNA5O15131 536 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CD1DP15813 335 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ALOX12P18054 663 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CCND3P30281 292 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 PFKPQ01813 784 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 GRM2Q14416 872 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RNF219Q5W0B1 726 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ERI1Q8IV48 349 aaKnown RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 PGBD5Q8N414 524 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF540Q8NDQ6 660 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SEPT8Q92599 483 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RPL3LQ92901 407 aaKnown RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 OTULINQ96BN8 352 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 TSGA13Q96PP4 275 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RANBP9Q96S59 729 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 LHPPQ9H008 270 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF696Q9H7X3 374 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 DNAH14Q0VDD8 3507 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 TFECO14948 347 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 THRBP10828 461 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 CDH3P22223 829 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 GPX3P22352 226 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CAPGP40121 348 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF648Q5T619 568 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 BHLHA9Q7RTU4 235 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RNF180Q86T96 592 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 HORMAD1Q86X24 394 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SLC7A5P1Q8MH63 180 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 LIX1Q8N485 282 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 DTWD1Q8N5C7 304 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 OR56A4Q8NGH8 313 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 OR2T11Q8NH01 316 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CAPSLQ8WWF8 208 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 UROC1Q96N76 676 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 MTERF1Q99551 399 aaKnown RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 IL12RB2Q99665 862 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CLPBQ9H078 707 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 EPB41L1Q9H4G0 881 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RAD21L1Q9H4I0 556 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RIC8BQ9NVN3 520 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SH3BP4Q9P0V3 963 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 UBA2Q9UBT2 640 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 ARID1AO14497 2285 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SCAMP1O15126 338 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZSCAN9O15535 394 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 FAM20BO75063 409 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF623O75123 536 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 GJB5O95377 273 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SERPINA1P01009 418 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 C1QCP02747 245 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 COL6A2P12110 1019 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 PCYT1AP49585 367 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ABRAXAS2Q15018 415 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 UGT3A2Q3SY77 523 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 LETMD1Q6P1Q0 360 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 LARP4Q71RC2 724 aaKnown RBP eCLIP9.62□□□□□ -0.874e-7■□□□□ 8.8
CMC1-209ENST00000477739 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 SFRP1Q8N474 314 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 PCSK9Q8NBP7 692 aaKnown RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 CTPS2Q9NRF8 586 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 LEF1Q9UJU2 399 aaPredicted RBP9.62□□□□□ -0.87
CMC1-209ENST00000477739 PLXNB2O15031 1838 aa9.62□□□□□ -0.87
CMC1-209ENST00000477739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.61□□□□□ -0.87
CMC1-209ENST00000477739 TBX1O43435 398 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 B4GALT3O60512 393 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 NCS1P62166 190 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 KCNAB2Q13303 367 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ZNF177Q13360 481 aaPredicted RBP9.61□□□□□ -0.87
CMC1-209ENST00000477739 CDH18Q13634 790 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 CCDC103Q8IW40 242 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ADGRG5Q8IZF4 528 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 TNIP2Q8NFZ5 429 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 OR7A2PQ8NGA2 310 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 TAMM41Q96BW9 452 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 MAGED4Q96JG8 741 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ACAT2Q9BWD1 397 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ARL15Q9NXU5 204 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ZNF490Q9ULM2 529 aaPredicted RBP9.61□□□□□ -0.87
CMC1-209ENST00000477739 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 RAI2Q9Y5P3 530 aa9.61□□□□□ -0.87
CMC1-209ENST00000477739 ZFC3H1O60293 1989 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms