RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 HACD1B0YJ81 288 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 TLL1O43897 1013 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 HMGCRP04035 888 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 MSX2P35548 267 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 LRRC74AQ0VAA2 488 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 GPS1Q13098 491 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 PIGHQ14442 188 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 TMEM199Q8N511 208 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CNTD1Q8N815 330 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 NDNFQ8TB73 568 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 SLC45A3Q96JT2 553 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 KLHL15Q96M94 604 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 SDCBP2Q9H190 292 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 HPF1Q9NWY4 346 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 MFHAS1Q9Y4C4 1052 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 MEIOCA2RUB1 952 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 ABCD4O14678 606 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CFLARO15519 480 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 NDUFS6O75380 124 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CHRNA1P02708 482 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 SERPINE1P05121 402 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CYBAP13498 195 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CPB1P15086 417 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CRHBPP24387 322 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 HOXA6P31267 233 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EEF1A1P68104 462 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EEF1A2Q05639 463 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 PLD1Q13393 1074 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EEF1A1P5Q5VTE0 462 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EPGNQ6UW88 154 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 C16orf62Q7Z3J2 963 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 PTAR1Q7Z6K3 402 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EPHX4Q8IUS5 362 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 KATNAL2Q8IYT4 538 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 OFCC1Q8IZS5 231 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 FAM83FQ8NEG4 500 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 OR6P1Q8NGX9 317 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 USP13Q92995 863 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 OR52B2Q96RD2 323 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 REXO4Q9GZR2 422 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 SNX5Q9Y5X3 404 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 PSAT1Q9Y617 370 aa12.49□□□□□ -0.41
RTFDC1-207ENST00000477573 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 UGT2B17O75795 530 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 RECQL4O94761 1208 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 MED26O95402 600 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 GNRH1P01148 92 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZP3P21754 424 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 DNAJB1P25685 340 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 DPP6P42658 865 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 CCR10P46092 362 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 CAPZA2P47755 286 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 UGT2B15P54855 530 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 CDH17Q12864 832 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF169Q14929 603 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ACOX1Q15067 660 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF404Q494X3 552 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 RUNDC3AQ59EK9 446 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 PDSS1Q5T2R2 415 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 HES5Q5TA89 166 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 LRRC38Q5VT99 294 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF425Q6IV72 752 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 DENND1BQ6P3S1 775 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 CPNE8Q86YQ8 564 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 WDTC1Q8N5D0 677 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 RCN3Q96D15 328 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 MCEEQ96PE7 176 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF300Q96RE9 604 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 BBS4Q96RK4 519 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 SPATA9Q9BWV2 254 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDH9Q9HC56 1237 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 ELF5Q9UKW6 265 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 USTQ9Y2C2 406 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDHGB2Q9Y5G2 931 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDHGB1Q9Y5G3 927 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms