RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NCOA7Q8NI08 942 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 CTCFLQ8NI51 663 aaPredicted RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 ESR2Q92731 530 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 KLHL15Q96M94 604 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 C7orf26Q96N11 449 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 JAKMIP1Q96N16 626 aaKnown RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 DUX3Q96PT4 197 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 MXRA8Q9BRK3 442 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 SLC26A6Q9BXS9 759 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 DDX4Q9NQI0 724 aaKnown RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 DDX43Q9NXZ2 648 aaKnown RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 SWAP70Q9UH65 585 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 POU2F3Q9UKI9 436 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 A4GNTQ9UNA3 340 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 NAALADL1Q9UQQ1 740 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 COL2A1P02458 1487 aaPredicted RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 ASTN2O75129 1339 aaPredicted RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 ERICH2A1L162 156 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TSPY2A6NKD2 308 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 ERI2A8K979 691 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 B4E171 279 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 E7EWF7 191 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 F5H0A9 414 aaPredicted RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 MPHOSPH10O00566 681 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 LDLRAD4O15165 306 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 RANBP6O60518 1105 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 MTA2O94776 668 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TSPY3P0CV98 308 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TSPY8P0CW00 308 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 FGF5P12034 268 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 CDH1P12830 882 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 EDN2P20800 178 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 CASTP20810 708 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 ANOS1P23352 680 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TSPAN7P41732 249 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TAF6P49848 677 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 NT5C2P49902 561 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 RAD23BP54727 409 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 ECT2LQ008S8 904 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 RELQ04864 619 aaPredicted RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 VEPH1Q14D04 833 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 GSTA3Q16772 222 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 MMEL1Q495T6 779 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 ATP13A5Q4VNC0 1218 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 PLEKHA7Q6IQ23 1121 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 LRRC8EQ6NSJ5 796 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 C19orf48Q6RUI8 117 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 IQCA1Q86XH1 822 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TEX19Q8NA77 164 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 BBS10Q8TAM1 723 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 LNX1Q8TBB1 728 aaPredicted RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 FBXL8Q96CD0 374 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 DYNLL2Q96FJ2 89 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 NEK1Q96PY6 1258 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 UBAC1Q9BSL1 405 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 GLIS2Q9BZE0 524 aaPredicted RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 TMEM39BQ9GZU3 492 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 DEFB129Q9H1M3 183 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 TAAR2Q9P1P5 351 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 RALYQ9UKM9 306 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 SCINQ9Y6U3 715 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 DDX60LQ5H9U9 1706 aaKnown RBP3.97□□□□□ -1.77
UBR3-209ENST00000477461 CNTNAP1P78357 1384 aa3.97□□□□□ -1.77
UBR3-209ENST00000477461 NEDD4P46934 1319 aa3.96□□□□□ -1.77
UBR3-209ENST00000477461 ATAD5Q96QE3 1844 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 SMCHD1A6NHR9 2005 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 IFIT3O14879 490 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 PLRG1O43660 514 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 PRDM1O75626 825 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 TBX6O95947 436 aaPredicted RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 MMP2P08253 660 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 G6PDP11413 515 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 UBL4AP11441 157 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 PAX3P23760 479 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 MCM3P25205 808 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 PSMA4P25789 261 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 KRT9P35527 623 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 ANP32AP39687 249 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 FMO5P49326 533 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 TFAP4Q01664 338 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 NEDD9Q14511 834 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 TCTN1Q2MV58 587 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 SGO1Q5FBB7 561 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 PPP6R3Q5H9R7 873 aaPredicted RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 HIST2H2BCQ6DN03 193 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 CCNI2Q6ZMN8 369 aaPredicted RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 RUFY3Q7L099 469 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 LINGO2Q7L985 606 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 SLC46A3Q7Z3Q1 461 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 NOXA1Q86UR1 476 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 TBC1D10CQ8IV04 446 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 BEST2Q8NFU1 509 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 CDCA5Q96FF9 252 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 MPP4Q96JB8 637 aa3.96□□□□□ -1.78
UBR3-209ENST00000477461 NAP1L4Q99733 375 aaKnown RBP3.96□□□□□ -1.78
UBR3-209ENST00000477461 UPF3BQ9BZI7 483 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms