RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KLHL35Q6PF15 583 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 UNQ6494/PRO21346Q6UXR6 183 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 ZNF572Q7Z3I7 529 aaPredicted RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 GPR150Q8NGU9 434 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 TMEM159Q96B96 161 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 FAM167BQ9BTA0 163 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 CARD6Q9BX69 1037 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 CCDC68Q9H2F9 335 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 SLC40A1Q9NP59 571 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 WHRNQ9P202 907 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 ZNF624Q9P2J8 865 aaPredicted RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 FAM169AQ9Y6X4 670 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 ZCWPW2A0A1B0GU75 182 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 KPNA5O15131 536 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 UBXN7O94888 489 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 APOA4P06727 396 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ITGB6P18564 788 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ARNTP27540 789 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 ARCN1P48444 511 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 CD151P48509 253 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CAV1Q03135 178 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ZNF470Q6ECI4 717 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CENPUQ71F23 418 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 WDR36Q8NI36 951 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 ZFPM2Q8WW38 1151 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ASZ1Q8WWH4 475 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ATXN7L3BQ96GX2 97 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 FERD3LQ96RJ6 166 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 TBC1D10AQ9BXI6 508 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 RDH14Q9HBH5 336 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 PPANQ9NQ55 473 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 INTS10Q9NVR2 710 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 ENTPD2Q9Y5L3 495 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 CFAP20Q9Y6A4 193 aaKnown RBP13.45□□□□□ -0.26
USF1-205ENST00000473969 MYLKQ15746 1914 aa13.45□□□□□ -0.26
USF1-205ENST00000473969 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 CACNA1BQ00975 2339 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CCDC187A0A096LP49 1063 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 TMEM8BA6NDV4 472 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 E5RI56 91 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 KDM1AO60341 852 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 ESR1P03372 595 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 PROS1P07225 676 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 TYRP1P17643 537 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CHRM3P20309 590 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 RPS3P23396 243 aaKnown RBP eCLIP13.44□□□□□ -0.26
USF1-205ENST00000473969 RBMS1P29558 406 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 FMO4P31512 558 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CCKBRP32239 447 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 ELK3P41970 407 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 PREPP48147 710 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 HSPA14Q0VDF9 509 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 PDIA2Q13087 525 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 SQSTM1Q13501 440 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 TRA2AQ13595 282 aaKnown RBP eCLIP13.44□□□□□ -0.26
USF1-205ENST00000473969 GPR18Q14330 331 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CRYMQ14894 314 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 TYSND1Q2T9J0 566 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 C3orf38Q5JPI3 329 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 OTOAQ7RTW8 1153 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 KCNMB4Q86W47 210 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 PLXDC1Q8IUK5 500 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CILP2Q8IUL8 1156 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 LILRA3Q8N6C8 439 aaPredicted RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 OR4D9Q8NGE8 314 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 TFGQ92734 400 aaPredicted RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 GATA6Q92908 595 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 CMKLR1Q99788 373 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 NUDT22Q9BRQ3 303 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 IARS2Q9NSE4 1012 aaKnown RBP13.44□□□□□ -0.26
USF1-205ENST00000473969 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CHMP2BQ9UQN3 213 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 CRYL1Q9Y2S2 319 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 PLXNB3Q9ULL4 1909 aa13.44□□□□□ -0.26
USF1-205ENST00000473969 C1QTNF9BB2RNN3 333 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 CASC3O15234 703 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms