RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ESX1Q8N693 406 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 AVL9Q8NBF6 648 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 MCUQ8NE86 351 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 ARRDC2Q8TBH0 407 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 FBXO25Q8TCJ0 367 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TADA1Q96BN2 335 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 OXNAD1Q96HP4 312 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LYSMD1Q96S90 227 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 FMO2Q99518 471 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 CTRCQ99895 268 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 GORASP1Q9BQQ3 440 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 RIOK2Q9BVS4 552 aaKnown RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TDRD1Q9BXT4 1180 aaKnown RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 RMI1Q9H9A7 625 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 APMAPQ9HDC9 416 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 ZNF71Q9NQZ8 489 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 ZDHHC18Q9NUE0 388 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 SIDT1Q9NXL6 827 aaKnown RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TBC1D29Q9UFV1 150 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 NFU1Q9UMS0 254 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 MAN2B2Q9Y2E5 1009 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TRBV23OR9-2A0A075B6M9 112 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CCDC151A5D8V7 595 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 PRR19A6NJB7 356 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 OR5K4A6NMS3 321 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 A8MU76 341 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 F5H423 210 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 POLR1CO15160 346 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 INPP4BO15327 924 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TP73O15350 636 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TOX3O15405 576 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 ERLIN1O75477 346 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TMEM63AO94886 807 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 ASMTLO95671 621 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 MT-CYBP00156 380 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 PRLP01236 227 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 EPOP01588 193 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 C9P02748 559 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 MMP2P08253 660 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 MLNP12872 115 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TCN2P20062 427 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 ECHS1P30084 290 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CD86P42081 329 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TNNT3P45378 269 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CD97P48960 835 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 PPM1FP49593 454 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CLCNKAP51800 687 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 WNT3AP56704 352 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 RPL26P61254 145 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 KLRB1Q12918 225 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 NFATC2Q13469 925 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 IHHQ14623 411 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 BRD3Q15059 726 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 DEFB109BQ30KR1 87 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 HENMT1Q5T8I9 393 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 ANKRD22Q5VYY1 191 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 KDELC1Q6UW63 502 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CHST15Q7LFX5 561 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 KDELC2Q7Z4H8 507 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 SLC9B2Q86UD5 537 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 PLXDC1Q8IUK5 500 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 LURAP1LQ8IV03 231 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 FAM26EQ8N5C1 309 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 SPATA22Q8NHS9 363 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 NCSTNQ92542 709 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 MIB2Q96AX9 1013 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 SMIM14Q96QK8 99 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 MLPHQ9BV36 600 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 FSD1LQ9BXM9 530 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 UCK1Q9HA47 277 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 XAB2Q9HCS7 855 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 ZNHIT2Q9UHR6 403 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 CNOT6Q9ULM6 557 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 RPL26L1Q9UNX3 145 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 KCTD3Q9Y597 815 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 OAS3Q9Y6K5 1087 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 RPS6KL1Q9Y6S9 549 aa8.92□□□□□ -0.98
SF3A1-206ENST00000471037 SPENQ96T58 3664 aaKnown RBP8.92□□□□□ -0.98
SF3A1-206ENST00000471037 TCRBV7S3A2A0A539 114 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 RGSL1A5PLK6 1076 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 FADS2P1A8MWK0 482 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 EIF3HO15372 352 aaKnown RBP eCLIP8.91□□□□□ -0.98
SF3A1-206ENST00000471037 NUAK1O60285 661 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PMPCBO75439 489 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 CLDN7O95471 211 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 ACP5P13686 325 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 HLA-DPA1P20036 260 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 EPHB1P54762 984 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 ARL4CP56559 192 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 UBE2IP63279 158 aaKnown RBP8.91□□□□□ -0.98
SF3A1-206ENST00000471037 CBLBQ13191 982 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 HIF1AQ16665 826 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 DNAJC21Q5F1R6 531 aaKnown RBP8.91□□□□□ -0.98
SF3A1-206ENST00000471037 FAM182AQ5T1J6 154 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 ARMC3Q5W041 872 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 TCTN3Q6NUS6 607 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 LRRC8BQ6P9F7 803 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 EMBQ6PCB8 327 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms