RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	CWC15	Q9P013	229 aa	Known RBP	4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	FZD10	Q9ULW2	581 aa		4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	PTRH2	Q9Y3E5	179 aa	Known RBP	4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	PTGDR2	Q9Y5Y4	395 aa		4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	SQOR	Q9Y6N5	450 aa		4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	NUP98	P52948	1817 aa		4.16	□□□□□ -1.74
SRRM1-208	ENST00000470243	CEMIP	Q8WUJ3	1361 aa		4.15	□□□□□ -1.74
SRRM1-208	ENST00000470243	MED23	Q9ULK4	1368 aa		4.15	□□□□□ -1.74
SRRM1-208	ENST00000470243	MYH8	P13535	1937 aa		4.15	□□□□□ -1.74
SRRM1-208	ENST00000470243	IGHV4-28	A0A0C4DH34	117 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243		A0A1W2PR77	199 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	GOLGA6L4	A6NEF3	574 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243		B4DGG1	531 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	VWA5A	O00534	786 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	OGG1	O15527	345 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	JRK	O75564	520 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	KCNK5	O95279	499 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	VNN2	O95498	520 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TOMM40	O96008	361 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	DNTT	P04053	509 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ACADL	P28330	430 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	HOXA13	P31271	388 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	RFX2	P48378	723 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	MXI1	P50539	228 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	PLCD1	P51178	756 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ZNF81	P51508	661 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	NUDT6	P53370	316 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CBX1	P83916	185 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ZBED6	P86452	979 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TFAP4	Q01664	338 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	LRMP	Q12912	555 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	STX1A	Q16623	288 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CCDC142	Q17RM4	750 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	PAPPA-AS1	Q5QFB9	102 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	LRCH2	Q5VUJ6	765 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	GGNBP1	Q5YKI7	109 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TYW3	Q6IPR3	259 aa	Known RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ZNF425	Q6IV72	752 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	C11orf87	Q6NUJ2	197 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	G2E3	Q7L622	706 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	IRF2BP2	Q7Z5L9	587 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	AACS	Q86V21	672 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	PIM3	Q86V86	326 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	KBTBD6	Q86V97	674 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	FOXRED2	Q8IWF2	684 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CCDC83	Q8IWF9	413 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	KIF18A	Q8NI77	898 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	OIT3	Q8WWZ8	545 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ADAMTS14	Q8WXS8	1223 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	RND1	Q92730	232 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	SLC22A18	Q96BI1	424 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TXNDC15	Q96J42	360 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	EGLN2	Q96KS0	407 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	JAKMIP1	Q96N16	626 aa	Known RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ZNF830	Q96NB3	372 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ABHD1	Q96SE0	405 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TMEM79	Q9BSE2	394 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	SLC29A3	Q9BZD2	475 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	SPRY4	Q9C004	299 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	FAM234A	Q9H0X4	552 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	HRH4	Q9H3N8	390 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	EBF3	Q9H4W6	596 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	SEBOX	Q9HB31	216 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	MMP25	Q9NPA2	562 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CNGB3	Q9NQW8	809 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ECHDC1	Q9NTX5	307 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	WSB2	Q9NYS7	404 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	MRPL15	Q9P015	296 aa	Known RBP	4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	COPG2	Q9UBF2	871 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	NARF	Q9UHQ1	456 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TINAG	Q9UJW2	476 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	PADI1	Q9ULC6	663 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	PAM16	Q9Y3D7	125 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CMAHP	Q9Y471	501 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	TRIM17	Q9Y577	477 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	DOCK3	Q8IZD9	2030 aa		4.15	□□□□□ -1.75
SRRM1-208	ENST00000470243	CHD8	Q9HCK8	2581 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	COL2A1	P02458	1487 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243		A0A1B0GVM2	712 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	OR2A25	A4D2G3	310 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	VPS37C	A5D8V6	355 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	SH2B2	O14492	632 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	WNT9B	O14905	357 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	PAPSS1	O43252	624 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	AP5Z1	O43299	807 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	SURF6	O75683	361 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	EGF	P01133	1207 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	ICAM1	P05362	532 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	NR2F1	P10589	423 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	IL11	P20809	199 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	U2AF2	P26368	475 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	NR4A2	P43354	598 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	ABAT	P80404	500 aa		4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	MRPS34	P82930	218 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-208	ENST00000470243	PCLAF	Q15004	111 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms