RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 ATOH1Q92858 354 aaPredicted RBP20.4■□□□□ 0.86
BRAF-202ENST00000469930 TMEM159Q96B96 161 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 SLC30A3Q99726 388 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 NUSAP1Q9BXS6 441 aaKnown RBP20.4■□□□□ 0.86
BRAF-202ENST00000469930 TMEM168Q9H0V1 697 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 ARRDC1-AS1Q9H2J1 176 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 GPAMQ9HCL2 828 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 DNAJC28Q9NX36 388 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 APOBEC3BQ9UH17 382 aaKnown RBP20.4■□□□□ 0.86
BRAF-202ENST00000469930 TLK1Q9UKI8 766 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 ACOT9Q9Y305 439 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 PRKAB1Q9Y478 270 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 ST14Q9Y5Y6 855 aa20.4■□□□□ 0.86
BRAF-202ENST00000469930 PCDH15Q96QU1 1955 aa20.39■□□□□ 0.86
BRAF-202ENST00000469930 A0A096LPK6 155 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 A0A1B0GTQ1 180 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 PROB1E7EW31 1015 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 ARHGAP33O14559 1287 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 ACP5P13686 325 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 CTSEP14091 401 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 CCNFP41002 786 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 MAPK9P45984 424 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 ARRB1P49407 418 aaPredicted RBP20.39■□□□□ 0.85
BRAF-202ENST00000469930 RGS4P49798 205 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 IL2P60568 153 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 ILF3Q12906 894 aaKnown RBP eCLIP20.39■□□□□ 0.85
BRAF-202ENST00000469930 ELOCQ15369 112 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 LPAL2Q16609 132 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 TAF1BQ53T94 588 aaPredicted RBP20.39■□□□□ 0.85
BRAF-202ENST00000469930 TMEM207Q6UWW9 146 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 ABRAXAS1Q6UWZ7 409 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 RD3Q7Z3Z2 195 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 CMC1Q7Z7K0 106 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 CLEC14AQ86T13 490 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 NRROSQ86YC3 692 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 TM7SF3Q9NS93 570 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 KLC4Q9NSK0 619 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 MKS1Q9NXB0 559 aa20.39■□□□□ 0.85
BRAF-202ENST00000469930 GON4LQ3T8J9 2241 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 A0A1W2PPM1 405 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 KHNYNO15037 678 aaKnown RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 PHGDHO43175 533 aaKnown RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 TSPAN12O95859 305 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 CFIP05156 583 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 ZNF806P0C7X5 589 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 ITGB6P18564 788 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 IDSP22304 550 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 NFE2L1Q14494 772 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 CYHR1Q6ZMK1 362 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 FAM83HQ6ZRV2 1179 aaPredicted RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 PIM3Q86V86 326 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 RASGRP3Q8IV61 690 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 ALKBH8Q96BT7 664 aaKnown RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 TLCD1Q96CP7 247 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 LRRC61Q9BV99 259 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 DERL2Q9GZP9 239 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 OR52A5Q9H2C5 316 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 TCEAL2Q9H3H9 227 aaPredicted RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 SSU72Q9NP77 194 aaKnown RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 SARS2Q9NP81 518 aaKnown RBP20.38■□□□□ 0.85
BRAF-202ENST00000469930 GMEB2Q9UKD1 530 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 CACNA1EQ15878 2313 aa20.38■□□□□ 0.85
BRAF-202ENST00000469930 A6NCN8 305 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 PIAS2O75928 621 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 CER1O95813 267 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 GSTA1P08263 222 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 SAT1P21673 171 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 ATP6V0D1P61421 351 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 HSPA14Q0VDF9 509 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 SHBQ15464 509 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 HLA-BQ31612 363 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 ZNF542PQ5EBM4 170 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 ACSBG2Q5FVE4 666 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 CAPRIN2Q6IMN6 1127 aaKnown RBP20.37■□□□□ 0.85
BRAF-202ENST00000469930 RAPH1Q70E73 1250 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 GKN2Q86XP6 184 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 PLEKHM1Q9Y4G2 1056 aa20.37■□□□□ 0.85
BRAF-202ENST00000469930 PATE3B3GLJ2 98 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 LMO7DNF2Z398 122 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 KLHL2O95198 593 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 MATN4O95460 622 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 LMNAP02545 664 aaKnown RBP20.36■□□□□ 0.85
BRAF-202ENST00000469930 ZNF883P0CG24 379 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 ACADLP28330 430 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 IRX4P78413 519 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 BOP1Q14137 746 aaKnown RBP20.36■□□□□ 0.85
BRAF-202ENST00000469930 TSNAXIP1Q2TAA8 658 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 UAP1L1Q3KQV9 507 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 SYTL3Q4VX76 610 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 PRRT3Q5FWE3 981 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 KANSL1Q7Z3B3 1105 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 TBC1D1Q86TI0 1168 aaPredicted RBP20.36■□□□□ 0.85
BRAF-202ENST00000469930 EXOC3L1Q86VI1 746 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 CPNE9Q8IYJ1 553 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 ZNF548Q8NEK5 533 aaPredicted RBP20.36■□□□□ 0.85
BRAF-202ENST00000469930 EEF1AKMT1Q8WVE0 214 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 ANKRD49Q8WVL7 239 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 NMRAL1Q9HBL8 299 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 DCDC2Q9UHG0 476 aa20.36■□□□□ 0.85
BRAF-202ENST00000469930 KCNK6Q9Y257 313 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms